Necator americanus (New World hookworm): NECAME_11882
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Entry
NECAME_11882 CDS
T04867
Name
(RefSeq) GTP-binding domain protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECAME_11882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nai03041
]
NECAME_11882
Spliceosome [BR:
nai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NECAME_11882
Complex C
U5 SnRNP specific factors
NECAME_11882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Dynamin_N
Septin
Ras
Roc
TniB
Motif
Other DBs
NCBI-GeneID:
25351910
NCBI-ProteinID:
XP_013298350
UniProt:
W2T2I9
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MDSDLYDEFGNYIGPEIGSDDDENEDDVPLAGDGDEDAEEGDDQEEMEDDAEEIPQNQIV
LHEDKKYYATAVEVYGDTVETIVQEEDAQPLTEPIIKPVIQRKFQASLYPVRCYISEYFS
VEHNLPETVYNKEYLADLMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFFRAEDAD
TRYTDTLFIEQQRGCSIKAMPVTIVMQDTRHKSYLLNIIDTPGHVNFSDEVTAAYRLCDG
VVIVVDAHEGVMMNTERVIRHAVQERLPITLCVNKIDRLILELKMPPADAYYKLRLVIDQ
VNALLQTFSEEDNTVLSPLLENVIFASGRFNVCFSLLSFANIYAERYGNINATEFARRLW
GDIYFNKNTRKFSKKPPTANTQRTFVEFILEPLYKIFSQVVGDVDTCLPHMMSELNIKLT
REEQKMNVRPLIALICKRFFGDFKSFVDLIVKNIKSPIENAKNKVEHIWLGPADSKLAAE
MSKCDASGPLMVHTTKNYPTADATSFRVLGRVMSGTIESNADVRVLGENYSIQDEEDCRR
LTVGRLWVHVARYQIEVSRVPAGCWALIEGIDQPIVKTSTIAELEYEEDMYIFRPLKFNT
KSVVKMAIEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGELYMDSVMHDM
RKVFSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENEV
VQIGWNRRRIGEFFQTKYDWDLLAARSIWAFGPDIAGPNVLLDDTLPSEVDKQLLGTVRE
SLVQGFQWATREGPLCEERQFLSFDIFLELALSIRNVKFKMLDAVIAKEPLYRGGGQVIP
TARRCAYSAFLMATPRLMEPYFVVEVIAPADCVSSVYTVLAKRRGHVTTDAPIPGSPMYS
IKAFIPVMDSFGFETDLRTHTQGQAFCMSVFNHWQIVPGDPLDKSIVIRPLELQPTPHLA
REFMIKTRRRKGLSEDVSVNKFFDDPMLLELAKQQDVFSYSGF
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatttgtacgacgagttcggaaactacataggtcctgaaataggttctgat
gatgatgagaatgaagatgatgttccacttgctggagacggtgatgaggacgccgaggaa
ggagatgaccaggaggaaatggaagatgatgctgaagaaattcctcagaaccagatagtt
cttcatgaggataaaaagtattacgcaacggctgttgaggtgtatggtgatactgtggag
accattgttcaagaagaagatgcacagcccctcaccgagcctatcatcaagcctgttatc
cagaggaaattccaggcaagtctttaccctgtcagatgctacattagtgaatatttttcc
gtggaacacaatttgcctgagactgtgtacaacaaagagtatctggcagatctcatggat
tgtcctcacatcatgagaaacgtagccatcgcagggcatcttcaccatggaaaaacaact
tttttggactgtcttatggagcaaacccatccggagttcttccgcgcagaagatgccgat
acgaggtacacagacaccctctttattgaacaacagcgtggttgttctatcaaagcaatg
ccagttaccatcgtgatgcaagacactcgtcataagagctatctgttgaatattatcgat
actccaggtcacgtgaacttctccgatgaagtgaccgctgcttatcgactttgtgatgga
gtagtgattgttgtggatgctcatgaaggggtaatgatgaatacggaacgagttattcgt
cacgctgtgcaagaacgcttgcccattacgttgtgtgttaataaaattgaccgccttatt
cttgagctaaaaatgcctccggctgacgcttactacaagcttcgtttggtcatcgatcaa
gtcaacgctttgctacagacgttctcagaagaagataacactgtcctgtcacctttgcta
gaaaacgtcattttcgcttctggtcgattcaacgtttgcttctcgctcctttcctttgct
aatatctatgctgagcgttatggaaatattaatgcaaccgagtttgcacgtcgtctctgg
ggcgacatctatttcaacaaaaacaccagaaagttttcgaagaagccaccaacggctaac
actcaaagaacttttgttgaatttattttggaacctctgtataagatcttcagccaggtt
gtgggagatgtggacacatgtttaccacatatgatgtctgagttgaacattaaactcacg
agagaagaacagaaaatgaacgtgcgacctcttattgcactcatttgcaaacggttcttc
ggcgacttcaaatcatttgtggatctgatcgtgaaaaatataaaatctccaattgaaaat
gctaagaataaggtggagcatatctggcttggcccagcagacagcaagctcgcagccgaa
atgtcaaaatgtgacgcaagtggcccgctgatggtgcatacaaccaagaactacccaaca
gcggatgctacatcattccgagttcttggacgagttatgagcggaacaatcgaaagtaat
gcagatgtgcgcgtacttggagaaaactacagtattcaggatgaagaagattgtcgccgc
ttgacggttggtcgactttgggtccatgtggcgaggtatcagatcgaagtctcccgcgtt
ccagctggttgttgggcactcattgaaggaattgaccagcccattgtcaaaacttcgaca
attgctgagttggaatatgaagaagatatgtacattttccgtcctctcaagttcaacacc
aagagtgtagtgaagatggctattgagccaattaatccttccgaactccctaaaatgttg
gatggattgaggaaggttaacaagtcatatccgctgctgacaacgcgtgtcgaagaatct
ggagaacatgtcttgctcggtacaggtgaactgtacatggacagcgttatgcatgacatg
agaaaggtgttctctgaaattgacatcaaagtcgccgatcctgtggttacgttctgtgaa
acagttgtggaaacatcctcgctaaagtgttttgctgagacaccgaacaaaaaaaacaaa
attacaatgatttctgagcctctcgaaaagggtctggctgaagatattgagaacgaggtt
gttcaaattgggtggaatcgtcgtagaataggagagtttttccaaacgaaatatgattgg
gatttactagcagctcgttctatatgggcgttcggtccagatatagcgggtcccaacgtt
cttcttgatgatactcttccttctgaggttgacaagcaacttttgggtactgttcgagaa
tcacttgttcaaggcttccagtgggctacgcgtgaagggccactctgtgaagagcgtcag
tttttgtcttttgatattttcttggaactcgcactctctattcgaaatgtgaaatttaaa
atgttggatgctgttattgcaaaagaaccactgtacagaggtggtggtcaagtgattcct
acagcgcgtcgatgcgcctactctgcattcttgatggccactcctcgtcttatggaacca
tatttcgtcgttgaagttattgcgccagcagattgcgtttcatcagtttatacagtatta
gcgaaacggagaggacacgtaacgactgatgcaccgattcctggatctcccatgtactcg
attaaggcgttcattcctgtaatggattcctttggctttgaaaccgatttacgtacacat
acgcaaggacaggcgttttgtatgtccgttttcaaccactggcagattgtacccggagat
ccactggataaatctatcgttatacgacctttagagttgcaaccgactcctcatcttgcc
agagagttcatgatcaaaaccagacgacgaaaaggtctgtccgaagatgtgtcggttaac
aaattcttcgacgatcctatgcttttggagttggcgaagcaacaggatgtattcagttat
tcagggttctaa
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integrated database retrieval system