KEGG   Necator americanus (New World hookworm): NECAME_11882
Entry
NECAME_11882      CDS       T04867                                 
Name
(RefSeq) GTP-binding domain protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECAME_11882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nai03041]
    NECAME_11882
Spliceosome [BR:nai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    NECAME_11882
 Complex C
   U5 SnRNP specific factors
    NECAME_11882
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III MMR_HSR1 EFL1 Dynamin_N Septin Ras Roc TniB
Other DBs
NCBI-GeneID: 25351910
NCBI-ProteinID: XP_013298350
UniProt: W2T2I9
LinkDB
Position
Unknown
AA seq 1003 aa
MDSDLYDEFGNYIGPEIGSDDDENEDDVPLAGDGDEDAEEGDDQEEMEDDAEEIPQNQIV
LHEDKKYYATAVEVYGDTVETIVQEEDAQPLTEPIIKPVIQRKFQASLYPVRCYISEYFS
VEHNLPETVYNKEYLADLMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFFRAEDAD
TRYTDTLFIEQQRGCSIKAMPVTIVMQDTRHKSYLLNIIDTPGHVNFSDEVTAAYRLCDG
VVIVVDAHEGVMMNTERVIRHAVQERLPITLCVNKIDRLILELKMPPADAYYKLRLVIDQ
VNALLQTFSEEDNTVLSPLLENVIFASGRFNVCFSLLSFANIYAERYGNINATEFARRLW
GDIYFNKNTRKFSKKPPTANTQRTFVEFILEPLYKIFSQVVGDVDTCLPHMMSELNIKLT
REEQKMNVRPLIALICKRFFGDFKSFVDLIVKNIKSPIENAKNKVEHIWLGPADSKLAAE
MSKCDASGPLMVHTTKNYPTADATSFRVLGRVMSGTIESNADVRVLGENYSIQDEEDCRR
LTVGRLWVHVARYQIEVSRVPAGCWALIEGIDQPIVKTSTIAELEYEEDMYIFRPLKFNT
KSVVKMAIEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGELYMDSVMHDM
RKVFSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENEV
VQIGWNRRRIGEFFQTKYDWDLLAARSIWAFGPDIAGPNVLLDDTLPSEVDKQLLGTVRE
SLVQGFQWATREGPLCEERQFLSFDIFLELALSIRNVKFKMLDAVIAKEPLYRGGGQVIP
TARRCAYSAFLMATPRLMEPYFVVEVIAPADCVSSVYTVLAKRRGHVTTDAPIPGSPMYS
IKAFIPVMDSFGFETDLRTHTQGQAFCMSVFNHWQIVPGDPLDKSIVIRPLELQPTPHLA
REFMIKTRRRKGLSEDVSVNKFFDDPMLLELAKQQDVFSYSGF
NT seq 3012 nt   +upstreamnt  +downstreamnt
atggattctgatttgtacgacgagttcggaaactacataggtcctgaaataggttctgat
gatgatgagaatgaagatgatgttccacttgctggagacggtgatgaggacgccgaggaa
ggagatgaccaggaggaaatggaagatgatgctgaagaaattcctcagaaccagatagtt
cttcatgaggataaaaagtattacgcaacggctgttgaggtgtatggtgatactgtggag
accattgttcaagaagaagatgcacagcccctcaccgagcctatcatcaagcctgttatc
cagaggaaattccaggcaagtctttaccctgtcagatgctacattagtgaatatttttcc
gtggaacacaatttgcctgagactgtgtacaacaaagagtatctggcagatctcatggat
tgtcctcacatcatgagaaacgtagccatcgcagggcatcttcaccatggaaaaacaact
tttttggactgtcttatggagcaaacccatccggagttcttccgcgcagaagatgccgat
acgaggtacacagacaccctctttattgaacaacagcgtggttgttctatcaaagcaatg
ccagttaccatcgtgatgcaagacactcgtcataagagctatctgttgaatattatcgat
actccaggtcacgtgaacttctccgatgaagtgaccgctgcttatcgactttgtgatgga
gtagtgattgttgtggatgctcatgaaggggtaatgatgaatacggaacgagttattcgt
cacgctgtgcaagaacgcttgcccattacgttgtgtgttaataaaattgaccgccttatt
cttgagctaaaaatgcctccggctgacgcttactacaagcttcgtttggtcatcgatcaa
gtcaacgctttgctacagacgttctcagaagaagataacactgtcctgtcacctttgcta
gaaaacgtcattttcgcttctggtcgattcaacgtttgcttctcgctcctttcctttgct
aatatctatgctgagcgttatggaaatattaatgcaaccgagtttgcacgtcgtctctgg
ggcgacatctatttcaacaaaaacaccagaaagttttcgaagaagccaccaacggctaac
actcaaagaacttttgttgaatttattttggaacctctgtataagatcttcagccaggtt
gtgggagatgtggacacatgtttaccacatatgatgtctgagttgaacattaaactcacg
agagaagaacagaaaatgaacgtgcgacctcttattgcactcatttgcaaacggttcttc
ggcgacttcaaatcatttgtggatctgatcgtgaaaaatataaaatctccaattgaaaat
gctaagaataaggtggagcatatctggcttggcccagcagacagcaagctcgcagccgaa
atgtcaaaatgtgacgcaagtggcccgctgatggtgcatacaaccaagaactacccaaca
gcggatgctacatcattccgagttcttggacgagttatgagcggaacaatcgaaagtaat
gcagatgtgcgcgtacttggagaaaactacagtattcaggatgaagaagattgtcgccgc
ttgacggttggtcgactttgggtccatgtggcgaggtatcagatcgaagtctcccgcgtt
ccagctggttgttgggcactcattgaaggaattgaccagcccattgtcaaaacttcgaca
attgctgagttggaatatgaagaagatatgtacattttccgtcctctcaagttcaacacc
aagagtgtagtgaagatggctattgagccaattaatccttccgaactccctaaaatgttg
gatggattgaggaaggttaacaagtcatatccgctgctgacaacgcgtgtcgaagaatct
ggagaacatgtcttgctcggtacaggtgaactgtacatggacagcgttatgcatgacatg
agaaaggtgttctctgaaattgacatcaaagtcgccgatcctgtggttacgttctgtgaa
acagttgtggaaacatcctcgctaaagtgttttgctgagacaccgaacaaaaaaaacaaa
attacaatgatttctgagcctctcgaaaagggtctggctgaagatattgagaacgaggtt
gttcaaattgggtggaatcgtcgtagaataggagagtttttccaaacgaaatatgattgg
gatttactagcagctcgttctatatgggcgttcggtccagatatagcgggtcccaacgtt
cttcttgatgatactcttccttctgaggttgacaagcaacttttgggtactgttcgagaa
tcacttgttcaaggcttccagtgggctacgcgtgaagggccactctgtgaagagcgtcag
tttttgtcttttgatattttcttggaactcgcactctctattcgaaatgtgaaatttaaa
atgttggatgctgttattgcaaaagaaccactgtacagaggtggtggtcaagtgattcct
acagcgcgtcgatgcgcctactctgcattcttgatggccactcctcgtcttatggaacca
tatttcgtcgttgaagttattgcgccagcagattgcgtttcatcagtttatacagtatta
gcgaaacggagaggacacgtaacgactgatgcaccgattcctggatctcccatgtactcg
attaaggcgttcattcctgtaatggattcctttggctttgaaaccgatttacgtacacat
acgcaaggacaggcgttttgtatgtccgttttcaaccactggcagattgtacccggagat
ccactggataaatctatcgttatacgacctttagagttgcaaccgactcctcatcttgcc
agagagttcatgatcaaaaccagacgacgaaaaggtctgtccgaagatgtgtcggttaac
aaattcttcgacgatcctatgcttttggagttggcgaagcaacaggatgtattcagttat
tcagggttctaa

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