Natrarchaeobaculum aegyptiacum: B1756_07315
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Entry
B1756_07315 CDS
T04999
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
naj
Natrarchaeobaculum aegyptiacum
Pathway
naj03030
DNA replication
naj03410
Base excision repair
naj03420
Nucleotide excision repair
naj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1756_07315 (ligA)
03410 Base excision repair
B1756_07315 (ligA)
03420 Nucleotide excision repair
B1756_07315 (ligA)
03430 Mismatch repair
B1756_07315 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naj03032
]
B1756_07315 (ligA)
03400 DNA repair and recombination proteins [BR:
naj03400
]
B1756_07315 (ligA)
Enzymes [BR:
naj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B1756_07315 (ligA)
DNA replication proteins [BR:
naj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B1756_07315 (ligA)
DNA repair and recombination proteins [BR:
naj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B1756_07315 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1756_07315 (ligA)
MMR (mismatch excision repair)
DNA ligase
B1756_07315 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1756_07315 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
5_3_exonuc
RUBY_RBDX
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
ARS91728
UniProt:
A0A2Z2I3A3
LinkDB
All DBs
Position
1474777..1476912
Genome browser
AA seq
711 aa
AA seq
DB search
MSDDERADGSGGESADEGGQNPYLRDPPTEFEPVDSLSESEAREQTALLREAIREHDRRY
YVEADPLIADRTYDSLFARLQELEDAFDLTHPDSPTRRVGGEPLEAFETVAHVAPMLSID
QSGEADDVREFDERVRRELDAADGDAADDLQYVCEPKFDGVSMAFVYEDGSLERAVTRGD
GREGDDVTRNVRTIGSVPQRLHGEYPDSLAVRGEVYMPKDAFQAYNRERIERGEEPFANP
RNATAGTIRQLDPAVVADRPLDVFFFDILDSSDGIDAHHEALERFPDWGLRVNDRVEVVD
SIDEAIAYRDALLEERDDLNYEIDGTVIKVDDREAREELGQTARHDRWAFAYKFPARAEV
TPIVDVAVQVGRTGRLTPVALLEPVDVGGVTVSRASLHNPEEIAEKNVNVGDTVRVQRAG
DVIPYVEEVVEKGTEGHYELPDHCPVCESPVERDGPLAHCTGGLACDAQLRRSVEYYASD
DGLDLEGLGEKSVRQLVDAGLVGSIADLYDVEREELTALEGWGETSAENLRSELEAAREP
ALADFLSALGIPHVGPSTARELAREFGSFEAFRDVAENDPERLEGVDDVGETVARQINEF
FASEANAAAIDDLLARVSPQEAETDAGGDDLEGLTFVFTGSLEGVTRAEAAETVEAHGAN
ATSSVSGNTDYLVVGANPGQTKRDDAEANDVPIVDEDEFRELLGEYGIDLE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacgagcgcgcagacggttctggaggagagagtgcagacgagggaggccag
aacccctaccttcgggacccaccgaccgagttcgaaccggtcgactccctctccgaatcc
gaggcccgcgagcagaccgcgttgctccgggaagccatccgcgaacacgaccggcgctac
tacgtcgaggccgacccgttgatcgccgatcgaacctacgacagcctgttcgcccgcctg
caggaactcgaagacgccttcgacctcacgcatcccgacagcccaacccggcgcgtgggg
ggcgaaccgctcgaggccttcgagacggtcgcacacgtcgcgccgatgctctcgatcgac
cagagcggcgaggccgacgacgtccgagagttcgacgaacgggtgcgacgggagttagac
gcagcggacggcgacgccgcggacgacctccagtacgtctgtgaacccaaattcgacggc
gtctcgatggcgttcgtctacgaggacggctcgctcgagcgcgcggtcacccgcggcgac
ggccgcgaaggcgacgacgtcacccggaacgtccggacgatcggctcggttccccagcga
ctccacggcgagtatcccgactctctcgcggtccgcggcgaggtctacatgcccaaagac
gcctttcaggcgtacaatcgcgagcggatcgaacgcggcgaggaaccgttcgcgaacccc
cggaacgcgaccgcagggacgatccgccagctcgatcccgccgtcgtggcggaccgcccg
ctcgacgtgttcttcttcgacattctggactcgagcgacggcatcgacgcccaccacgaa
gcgctcgagcggttccccgactggggactgcgagtgaacgaccgcgtcgaggtcgtggat
tcgatcgacgaggccatcgcctaccgcgacgccctgctcgaagagcgagacgacctgaac
tacgagatcgacggtaccgtcatcaaggtcgacgaccgcgaggcccgcgaggaactcggc
cagactgccaggcacgaccgctgggcgttcgcctacaagttccccgcccgcgcggaggtg
accccgatcgtcgacgtcgccgtgcaggtgggtcggacgggccgactgacgcccgtcgcg
ctgctcgagccggtcgacgtcggcggcgtgacggtctcgcgggcgagcctgcacaatccc
gaggagatcgccgagaagaacgtcaacgtcggcgatacggtccgcgtccagcgcgccggc
gacgtcatcccctacgtcgaggaggtcgtcgagaagggcaccgagggccactacgaacta
cccgaccactgcccggtctgtgagagccccgtcgagcgcgacggccccctcgcccactgt
accggcgggctggcgtgtgacgcccagcttcggcggtcggtcgagtactacgccagcgac
gacggcctcgacctcgagggactcggcgagaagagcgtccgccagctcgtcgacgccggc
ctcgtgggctcgatcgccgacctctacgacgtcgagcgcgaggagctaacggccctcgag
ggctggggcgagacgagcgccgagaacctgcgatcggaactcgaggcggcgcgggagccc
gcgcttgcggacttcctctcggcgctcggcatcccccacgtcggtccgtcgaccgcccgc
gaactcgcccgcgagttcgggagcttcgaggccttccgcgacgtcgccgagaacgacccg
gaacgactcgaaggcgtcgacgacgtcggcgaaaccgtcgcccggcagatcaacgagttc
ttcgcgagcgaggccaacgccgcggcgatcgacgacctgctggcgcgggtctctccgcaa
gaagccgagacggacgcgggcggcgacgacctcgaggggctgaccttcgtcttcaccggc
tcgctcgagggcgtcacccgcgcggaggccgccgagaccgtcgaggcccacggcgcgaac
gccacgagcagcgtctcgggcaacacggactacctcgtcgtcggcgcgaatcccggccag
acgaaacgcgacgacgccgaggcgaacgacgtcccgatcgtcgacgaagacgagttccgg
gaactgctcggggagtacggaatcgacctcgagtga
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integrated database retrieval system
