Nakamurella sp. PAMC28650: H7F38_07550
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Entry
H7F38_07550 CDS
T08954
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7F38_07550 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naka03400
]
H7F38_07550 (nth)
Enzymes [BR:
naka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H7F38_07550 (nth)
DNA repair and recombination proteins [BR:
naka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7F38_07550 (nth)
Prokaryotic type
H7F38_07550 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
DUF4680
RecR_HhH
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
QNK83588
UniProt:
A0A7G8WT95
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All DBs
Position
1673884..1674687
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AA seq
267 aa
AA seq
DB search
MPTGKPASGRPATGKPARVKRATAPLTPLARTRRARKLAAQLALEFPDAVCELDFTTPLD
LAVATILAAQCTDVRVNMVTPALFARYRSPADYAGADRAELEEMIRTTGFFRNKANSIIG
LGRGVLERFDGELPGNLDDLVTLPGIGRKTANVVLGNAFGVPGITVDTHLGRLVRRWGLT
SQTDPVKVELELNAMLPPADWTMFSHRAIYHGRRVCHAKKPACAACFLADLCPSVGSGPM
EPTLAAKLVAGQERPHLLAMVGLAEAE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ctgccgacgggcaagcccgcgtcgggccggccggccacgggcaagccggcgagggtcaag
agggcgaccgccccgctcacgccgttggcccgcacccggcgggcgcgcaagctcgctgcg
caactggcgctggagttccccgacgcggtctgcgagctggacttcaccacgccgctggac
ctggcggtggccaccatcctcgccgcgcagtgcaccgacgtgcgggtcaacatggtcacc
ccggcgttgttcgcccgttaccggagcccggccgactacgcgggcgccgatcgggccgag
ctcgaggagatgatcaggacgacgggcttcttccggaacaaggcgaactcgatcatcggt
ctcggtcggggcgtgctggagcggttcgacggcgagcttcccggcaatctggatgacctc
gtgacgttgccgggaatcggacggaagacggcgaacgtggtgctgggtaacgctttcggc
gtccctggcatcacggtcgacacgcatctgggccggctggtgcgacgctggggtctgacc
agccagaccgacccggtgaaggtggagctggaactgaacgcgatgctcccgccggccgac
tggacgatgttctcccaccgggcgatctatcacggccgccgcgtctgccacgccaagaag
ccggcctgcgctgcgtgcttccttgccgacctgtgtccctcggtggggtcggggccgatg
gagccgaccctcgcggccaagctggtggccggtcaggaacggccccatctgctggccatg
gtgggactggcggaggccgagtga
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