Candidatus Nitrospira allomarina: PP769_08020
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Entry
PP769_08020 CDS
T09427
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PP769_08020 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_08020 (nth)
Enzymes [BR:
nall01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PP769_08020 (nth)
DNA repair and recombination proteins [BR:
nall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PP769_08020 (nth)
Prokaryotic type
PP769_08020 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WNM59689
UniProt:
A0AA96GJS2
LinkDB
All DBs
Position
1799659..1800363
Genome browser
AA seq
234 aa
AA seq
DB search
MSGLASPMSRLRTARSPMESPVEAKKRVRRILAALDQSVPDVRVELDSSNRLELLVATIL
SAQCTDQRVNQVTPNLFARYRTAQDYAGADPAELEALIRTTGFYKNKARHLIGCGQALVQ
RFHGMVPGTMKDLTSLPGVGRKTANVILGSSVGEPAIVVDTHVKRVANRLGLTRSQDPTK
IEEDLQRLLPKSQWTNGAQRLLLHGRYVCLARTPKCAHCVLDSDCGWEGKRKPT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcttgcgtcaccgatgagtcgtctcagaacagcacgatccccgatggaatcg
ccggtagaagcgaaaaagcgagtacgtcggatccttgccgccttggatcaatccgttcct
gacgtgagagtagaattagattcctccaaccggcttgagttgttggtggccacaattctt
tcggcccaatgcacagaccagagagtcaaccaggtaaccccgaatctgtttgcccgctat
cgcacggcacaggattatgccggtgcggatccagccgaattagaagcgctcattcggaca
acaggattttataaaaataaagcgcgtcatctcattgggtgtggccaagctctggtgcag
cgttttcacggcatggtccccggaacgatgaaggacttaacttccctgcccggcgttgga
cgaaaaacagccaatgttattttggggagttctgtgggagagcctgccattgtggttgat
actcatgtgaagcgggtagccaatcgcctcggattgacgagaagccaagacccgaccaaa
attgaagaggatcttcaacgcctcttaccaaaatcgcaatggacgaacggggctcaacgc
ctcctacttcatgggcgatatgtgtgtttggccagaacgccaaagtgtgctcattgtgtg
cttgattcagactgtggatgggaaggaaaacgaaagccaacatga
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