Nannocystis punicea: O0S08_50860
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Entry
O0S08_50860 CDS
T08663
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nann
Nannocystis punicea
Pathway
nann01501
beta-Lactam resistance
nann01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O0S08_50860
01503 Cationic antimicrobial peptide (CAMP) resistance
O0S08_50860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nann03036
]
O0S08_50860
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nann02000
]
O0S08_50860
01504 Antimicrobial resistance genes [BR:
nann01504
]
O0S08_50860
Chromosome and associated proteins [BR:
nann03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
O0S08_50860
Transporters [BR:
nann02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
O0S08_50860
Antimicrobial resistance genes [BR:
nann01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O0S08_50860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
YknX_C
Beta-barrel_RND_2
HH_AAEA_pHBA
Biotin_lipoyl
HH_EMRA
ATPD_C_metazoa
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WAS94485
UniProt:
A0ABY7H5D6
LinkDB
All DBs
Position
13181125..13182429
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AA seq
434 aa
AA seq
DB search
MLASRLFPLVLLALVACGSQGSAAAPKSAPGPVEVAVLTLAPTPVTLTRELPGRVSALRI
AEVRARVSGVVEKRLFVEGSDVKEGEPLYRIEAAPYQASLSSAQANLRRAQSGLASAQDI
AKRDEDLLSNAGAVSLETAERSTASLRSIEADIAAGKAAVQTAKINLGYTTVTAPVSGRI
GRSAVTEGAFVQASPATLMATIQQIDKVFVDVTQSTAELQRLRRELESDKLRPAGAATTV
TLLLEDGSKYSETGTLEFTDVTVEPGTGSVLLRAVFPNPRGELLPGMFVRARIDQGEDPA
AILVPQRAVTRDTRGQAWAMVVGAENKVERRKLVADRVVGNNWRVTSGLFAGEQVIVDGL
QKIRPGAVVTTVAAPPEEQPAAGAAPPEAVASAGEAGDAQGEPASEGKAEAPAAASEGKA
PAAAAGEGKAEAKQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgtctcggctcttccccctggtcttgctcgcgctcgtggcctgcggctcgcag
gggtcggcagcggctccgaaatcggccccagggccggtcgaggtcgcggtgctgacgctc
gcgccgacccccgtgactctgacccgcgagctgccggggcgggtttcggcgctgcggatc
gcagaggtccgcgcccgggtcagcggggtcgtcgagaagcggctgttcgtcgagggcagc
gacgtgaaggagggcgagccgctgtaccgcatcgaggcggcgccgtaccaggcgagcctc
agctcggcgcaggccaacctgcggcgggcgcagtcgggtctggcctccgcgcaggacatc
gccaagcgcgacgaggatttgctcagcaacgccggggccgtcagcctcgagaccgccgag
cgctcgacggcgtcgctgcggtcgatcgaggccgacatcgcggccggcaaggcggccgtg
cagacggccaagatcaacctcggctacaccaccgtgacggcgccggtgagcgggcggatc
ggccgctcggcggtgacggagggcgcattcgtgcaggcgtcgccggcgacgctgatggcg
accatccagcagatcgacaaggtcttcgtcgacgtgacgcagtcgacggccgagctgcag
cggctgcgccgcgagctcgagagcgacaagctgcgtccggccggagcggcgaccacggtc
actctgttgctcgaggacggcagcaagtactccgagacgggcacgctcgagttcaccgac
gtcaccgtcgagccggggaccggctcggtgctgctgcgcgcggtgttccccaacccgcga
ggcgagctgctgccgggcatgttcgtgcgcgcccgcatcgatcagggcgaggacccggcg
gcgatcctggtgccgcagcgcgcggtgacccgcgacactcgcgggcaggcgtgggcgatg
gtggtcggcgccgagaacaaggtcgagcggcgcaagctggtcgccgatcgcgtggtcggc
aacaactggcgggtgacctcggggctgttcgccggcgagcaggtgatcgtcgacgggttg
cagaagatccgcccgggagcggtggtcaccacggtggccgcgccgcccgaggagcagccg
gccgccggcgcagcgccgcccgaggcggtggcgtcggcgggcgaggcgggcgacgcccag
ggcgagcccgcgagcgagggcaaggccgaggctccggccgcggcgagcgagggcaaggct
ccggccgccgcagcgggcgagggcaaggccgaggcgaagcagtag
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