Neisseria animalis: D0T90_02135
Help
Entry
D0T90_02135 CDS
T06425
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
naq
Neisseria animalis
Pathway
naq03030
DNA replication
naq03410
Base excision repair
naq03420
Nucleotide excision repair
naq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0T90_02135 (ligA)
03410 Base excision repair
D0T90_02135 (ligA)
03420 Nucleotide excision repair
D0T90_02135 (ligA)
03430 Mismatch repair
D0T90_02135 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naq03032
]
D0T90_02135 (ligA)
03400 DNA repair and recombination proteins [BR:
naq03400
]
D0T90_02135 (ligA)
Enzymes [BR:
naq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
D0T90_02135 (ligA)
DNA replication proteins [BR:
naq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D0T90_02135 (ligA)
DNA repair and recombination proteins [BR:
naq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
D0T90_02135 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0T90_02135 (ligA)
MMR (mismatch excision repair)
DNA ligase
D0T90_02135 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D0T90_02135 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QEY23444
UniProt:
A0A5P3MPI1
LinkDB
All DBs
Position
469987..472470
Genome browser
AA seq
827 aa
AA seq
DB search
MNQILQKIQNFTALLNRYAYEYYTLDAPSVPDAEYDRLFRELEALEREYPEHRQPDSPTQ
RVGGAALAGFETVRHEVPMLSLNNAFSPQDENGVFDHAEMYAFDERVRGGLGAETPEYVI
EPKFDGLAVSLLYRDGILVRAATRGDGTSGEDVTQNVKTIANIPLRLHGNHLPELIEVRG
EVLMLKADFAALNQRQLESRQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQQQG
GLTAAEHIQELAYLDGLGFSLPKGHYACFSNIAAVLAFYEQMQAERPDLPYEIDGMVVKV
NSLAQQETLGFVSRAPRWAIAHKFPAEEALTIVEAIDVQVGRTGAVTPVARLQPVFVGGV
TVTNATLHNEGETQRKDVRVGDTVVVRRAGDVIPEVVRVVWERRPMKTIDTVPAATLSDG
LQNDLFADAAMPSEPVQTAQVPLYPQYRLPDACPICGSSIEREEGEAVARCSGGMLCQAQ
RAQGLIHFASRKMMDIDGLGQKHIEQLVAQDLVRHFADLYRLDIPTLQKMKENADAMPSA
NEPDGTAGLSDSLKKTSDGTAKKQPTKWAENILAGLEASKQPDLARFLFALGIRHVGERT
AKVLAQAFGSLENVRRAPEPVLACLPDIGTVVARSIAQFFAQNEQQAMIDELLAVGVRPK
EQAVTLPLAQYLAPERWIARLPGFKTSENKAAALWDLAGKSIEGLICDKALPAEWQQWRD
IETNTVLLHTMCRFLAGMPSENTGGGSDGLHAAAAGKTFVLTGTLPTLKRDEAQAMIEAA
GGKVSGSVSKKTDFVVAGEAAGSKLEKANALGIAVLDEAALLDLLKP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagattctacaaaaaatccaaaactttaccgcgctgctcaaccgctacgcttac
gaatactacaccctcgacgcgcccagcgtgcccgatgccgaatacgaccgcctgttccgc
gaacttgaggcattggaacgcgaataccccgaacaccggcagcccgacagccccacccaa
cgcgtcggcggcgcggccttggccggttttgaaaccgtgcgccacgaagtgccgatgctg
tcgctgaacaacgccttttcaccacaagacgaaaacggcgtattcgaccatgccgagatg
tatgccttcgacgaacgcgtgcgcggcggcttgggtgcggaaacgccggaatatgtcatc
gaaccgaaattcgacggtctggccgtcagcctgctctaccgcgacggtatcttggttcgc
gcggcaacgcgcggagacggcaccagcggcgaagatgtcacgcaaaacgtcaaaaccatt
gccaatatccctttgcggctgcacggcaaccatctgccagaactgattgaagtgcgcggc
gaagtgctgatgctgaaagccgattttgccgcactcaaccaacgccagctcgaaagcagg
caaaagccgtttgccaacccgcgcaacgcggcagcgggtagcctgcgccagttggattcc
aagattacagcgcaacgcaaactgcattttttcgcctacggcatcgcgcagcagcaaggc
ggtttgacggcggcagaacacattcaagagctggcttatttggacggactcggtttcagc
ctgcccaaaggacactacgcctgcttctccaatattgccgccgtactggctttttacgaa
caaatgcaggccgaacgccccgatttgccctatgaaatcgacggcatggtggtcaaagtc
aacagcttggcgcagcaggaaacgctgggctttgtttctcgcgcgccgcgctgggccatc
gcgcacaaattcccggccgaagaagcattaaccattgtggaagccattgatgtacaagtc
ggccgaaccggcgcggtcacccccgtggcccgcctgcagccggtatttgtcggcggcgta
accgtgaccaacgccactttgcacaacgaaggcgaaacccagcgcaaagacgtacgtgtc
ggcgatacggtggtggtgcgccgcgcgggagacgtgattcccgaagtggtgcgcgtggtg
tgggaacgccgtccgatgaaaacaattgacaccgtgcctgccgctacgctttcagacggc
ctgcaaaatgatttgtttgccgatgccgcgatgccgtccgaaccggtgcaaaccgcgcag
gtgccgctttatccgcaataccgcctgcccgatgcctgcccgatttgcggcagcagcatc
gagcgcgaagaaggcgaagcggtggcgcgctgcagcggcggcatgttgtgtcaggcacaa
cgtgcgcaggggctgattcattttgcttcgcgcaaaatgatggacatcgacggtttgggg
caaaaacacatcgaacagctggtggcgcaggatttggtgcgccattttgccgatttgtac
cgcttggatattccgactttgcagaaaatgaaggaaaacgccgatgccatgccgtctgca
aatgagccggacggcacagcaggtttatcggacagtttgaaaaagacttcggacggtact
gcaaaaaaacagccgaccaaatgggcggaaaacattctggccggtttggaagccagcaag
cagccggatttggcgcgtttcctgttcgcactcggcatacgccacgtcggcgagcgtacc
gccaaagtattggcgcaggcattcggcagcttggaaaacgtccgccgcgcacccgaaccg
gtgctggcctgcctgcccgacatcggcacagtcgtcgcccgctccatcgcccaattcttc
gcacaaaacgaacagcaggccatgatagacgaattgcttgccgtcggtgtccgcccgaaa
gaacaggccgttacgctgccgttggcgcaataccttgcccccgaaagatggattgcccgc
ctgcccggtttcaaaaccagcgaaaacaaagccgccgccctgtgggacttggccggaaag
agcatagaaggactaatctgcgacaaagccctgcccgccgagtggcagcagtggcgcgat
attgaaaccaataccgtcctgctgcataccatgtgccggtttttagccggcatgccgtct
gaaaataccggcggcggttcagacggcctccacgctgccgccgcaggtaaaaccttcgta
ctcaccggcacgctgcccaccctcaagcgcgatgaggcgcaggccatgattgaggccgca
ggcggcaaagtatccggcagcgtttccaaaaaaaccgattttgtggttgccggcgaagcg
gcaggcagcaaactggaaaaagccaacgctttggggattgccgttttggacgaggctgcg
cttttggatttgttaaaaccgtaa
DBGET
integrated database retrieval system
