Nocardioides aquaticus: ENKNEFLB_03853
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Entry
ENKNEFLB_03853 CDS
T07580
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
naqu03009
]
ENKNEFLB_03853 (rlmC)
Enzymes [BR:
naqu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ENKNEFLB_03853 (rlmC)
Ribosome biogenesis [BR:
naqu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ENKNEFLB_03853 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
MTS
Methyltransf_11
Methyltransf_ANTKMT
Methyltransf_15
Cons_hypoth95
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QVT81443
UniProt:
A0ABX8EQ34
LinkDB
All DBs
Position
complement(3928506..3929678)
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AA seq
390 aa
AA seq
DB search
MHRATGGVRARSLRRVQCDYFDAGACRSCTWMGQPYDEQLAAVHAAAVAALGERPGLVWS
EPVARAEEGFRNKAKMVVGGTVEQPTLGILDRAGHGVDLRHCGLHEPALHDALPVLAALV
TRAALVPYDVPTRRGELKHVLATVAPDGGLMVRFVLRSTESLPRLRKHLPWLHEQLPGLV
VASVNLQPEHKAVLEGPEEVVLTEQSTLPLRLAGLDLRLRPQGFFQTNTAVAAALYAEAA
AWTRDLGARSAWDLYCGVGGFALTLAGAGVPDVVGVELSAEAVTAARDSAERAGLDGVRF
EAGDATAWAAAQEHAPDLVVVNPPRRGIGAALAGWLDASGARHVLYSSCHSGSLARDLDA
MPSWEPVRGRVFDMFPQTAHHEVLVLLRRR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgtgccacaggcggggtgcgggcccgtagcctgcggcgggtgcagtgcgactac
ttcgacgccggggcctgccggtcctgcacgtggatgggtcagccgtacgacgagcagctc
gccgccgtgcacgccgccgccgtcgcggcgctgggtgagcgtcccggcctggtgtggtcc
gagcccgtcgcgcgggcggaggagggcttccggaacaaggcgaagatggtcgtcgggggc
accgtcgagcagcccacgctgggcatcctggaccgtgcgggccacggcgtcgacctgcgc
cactgcggcctgcacgagccggcgctgcacgacgcgctgccggtgctggccgcgctggtc
acccgcgccgcgctggtcccgtacgacgtcccgacccgccgcggcgagctcaagcacgtc
ctggccaccgtcgcccccgacggcggcctgatggtccgcttcgtcctgcgcagcaccgag
tccctgccgcggctgcgcaagcacctgccctggctccacgagcagctgcccggcctggtc
gtggcgtcggtgaacctgcagcccgagcacaaggccgtgctcgaggggcccgaggaggtc
gtgctgaccgagcagtccacgctgccgctgcggctggccgggctcgacctgcggctgcgc
ccgcaaggcttcttccagaccaacaccgccgtcgctgcggcgctgtacgccgaggcggcc
gcctggacgcgggacctgggggcccgcagcgcctgggacctctactgcggtgtcggcggg
ttcgcgctcaccctggccggggcgggcgtgcccgacgtggtcggggtcgagctcagcgcg
gaggcggtgaccgcggcccgggacagcgccgagcgggcggggctggacggggtgcggttc
gaggccggcgacgcgacggcctgggccgctgcgcaggagcacgccccggacctggtggtg
gtcaacccgccgcggcgggggatcggcgccgccctcgcgggctggctggacgcctcgggc
gcgcgccacgtcctctactccagctgccacagcgggtcactggcccgcgacctcgacgcg
atgccctcgtgggagccggtgcgcgggcgggtcttcgacatgttcccgcagaccgcgcac
cacgaggtgctggtgctgctgcgccggcggtag
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