Numenius arquata (Eurasian curlew): 141474985
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Entry
141474985 CDS
T11436
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141474985 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
narq03041
]
141474985 (EFTUD2)
Spliceosome [BR:
narq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141474985 (EFTUD2)
Complex C
U5 SnRNP specific factors
141474985 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
141474985
NCBI-ProteinID:
XP_074019189
LinkDB
All DBs
Position
23:complement(2328640..2352021)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttgggaactacatcgggccagagctggactcggac
gatgatgacgatgagttgggcagagagtctaaagatctggacgagcttgaggatgatgat
gatgacgatgatatgggagaccatgacgaggaccaccctgggatggaggtggtgctgcat
gaggataagaaatactatcccaccgccgaggaggtctacgggcccgaagtggagaccata
gtacaagaggaagacacacagcccctcactgagcctattattaaacctgtgaaaaccaaa
aagttctctctgatggaacagacgttaccggtcactgtctatgagatggatttcctggcg
gatctgatggacaactcggagctcattcgaaacgtgactctgtgtgggcacctgcaccac
gggaagacgtgttttgtcgactgcctgatagaacagacgcacccagaaatccggaagcgc
tacgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtgggg
atcaagagcacaccagtgaccattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcacgtcaatttttccgatgaggtgaccgctggccttcgc
atttcggacggcgttgtgcttttcattgatgcggccgagggggtgatgctgaacacggag
cggctgatcaaacacgcggtgcaggaaaggctggcggtgactgtgtgcatcaacaagata
gaccgcctgatcctggagctgaaactgccccctacggatgcttattacaaactccgacat
atcgtggacgaagttaatgggctgatcagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgca
aagcggctttggggtgacatctatttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacaccaccctgcctaggactctggatgaacttggc
atccacctgaccaaagaggaactgaaattgaacatccggcccctcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgcgtccagcacatcccctcc
ccgaaggtgggggccaagacgaaaattgaacatacctacaccggtggcgttgactctgat
ctgggggaggccatgagtgaatgcgaccctgacggaccgctgatgtgtcacaccacaaaa
atgtacagcacagacgatggcgttcagttccacgcctttggcagagtgctcagtggtacc
atccacgctgggcagcccgtgaaggtcctcggagaaaactataccttggaagatgaggag
gattcccagatctgcactgtcgggcgcctctggatctcggttgcgaggtaccacattgag
gttaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagacggcaactgtcacggagcctcgtggcaacgaggaggctcagatcttccgtcccttg
aagttcaacaccacgtctgtcatcaaaattgctgtagagccagtcaacccctcagagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagttacccctcgcttactactaag
gtggaggagtctggggagcacgtgatcctggggacgggagagctctacctggattgcgtg
atgcacgatctacggaagatgtattcggagattgatatcaaggttgctgatccagttgtg
acattctgcgagacggtggtggaaacatcctccctcaagtgctttgccgagacgcccaac
aagaagaacaagatcacgatgattgctgagcctctggagaagggactcgcggaggacatt
gaaaatgaagtagtccagatcacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagacgccact
ggcccaaacatcctggtagacgatacgctgccctcagaggtggacaagtcgctgctgggc
tcggtgaaggacagcattgtgcaggggtttcagtggggaaccagggaagggcccctctgt
gacgagttgatccgcaacgtgaagtttaagatcctggatgcggtgattgctcaggaaccc
ttgcaccggggtggaggacagatcatcccgacggcccggagagtggtctattccgctttc
ctgatggccacccctcgcttgatggagccctactactttgtggaggtgcaggctcctgcc
gattgcgtgtctgcggtgtacacggtcctggccaggcggagaggccacgtgacacaagat
gctccgatcccaggctcccctctctacaccatcaaagccttcatcccagccattgattca
tttggctttgagacagacctgaggacccacacgcagggacaagccttctcgctctctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccggccc
ctggagccccagccggccccgcatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagcgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ttggccaagcaagacgtcgttctcaactaccccatgtga
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