Entry |
|
Symbol |
TDG
|
Name |
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
|
KO |
|
Organism |
nasi Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:nasi00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112391036 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:nasi03400]
112391036 (TDG)
Enzymes [BR:nasi01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
112391036 (TDG)
DNA repair and recombination proteins [BR:nasi03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112391036 (TDG)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
405 aa
MEAENAGSCSLQHAQAFYTFPFQQTMAEVPMAVMNEQEMPEVPAPAPAQEPTQETPKGRK
RKPRTTEPKTPVEPKKPTEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLP
GKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEV
FGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
ERNTDVQEVQYTFDLRLAQEDAKKMAVKEEKYDPGYEAAYGGAYSENPCGSEPCSFSSDG
LTADSGGSTFSDIPNGQWMTQSFTDQIPSFNNHCGMQEQEEGNHA |
NT seq |
1218 nt +upstreamnt +downstreamnt
atggaagcggagaacgcaggcagctgttcccttcagcacgcgcaagctttttatacattt
ccattccaacaaacgatggctgaagttcctatggcagttatgaatgaacaagaaatgccg
gaagttccagccccagctcctgctcaggaacccacacaagaaactccaaaaggaaggaaa
agaaaacccagaacaacagaaccaaaaacaccagtggaacccaaaaaacccactgaagcc
aaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagacacattt
aaagtgaaaagaaaagtagaccggttcaatggtgtttcagaagctgaacttttgaccaag
actctaccggacattttgaccttcaatctggacattgtgattattggcataaacccagga
ctaatggctgcttacaaagggcatcattaccctggacctggaaaccatttttggaagtgt
ctgtttatgtcagggctgagtgaggtccaactgaatcacatggatgatcacactttacca
ggaaaatatggtattggatttaccaatatggtggaaaggacaacaccaggcagcaaggat
ctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacagaaatat
cagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaggaagtt
tttggagtaaaagttaagaacttagaatttggacttcaaccgcataagataccagacaca
gaaacgctctgctatgttatgccatcatccagtgcaagatgtgctcagtttcctcgagcc
caggacaaagttcattactacattaagctgaaagacttaagagatcagttgaaaggcatt
gagcgaaacacagacgtccaagaggtgcaatatacatttgacctgcggctagcccaagag
gatgcaaagaagatggctgtgaaggaagaaaagtatgatccgggttatgaagcagcgtac
ggtggtgcttatagtgaaaatccgtgcggtagtgaaccttgcagcttctcttcagatggg
ctgacagctgacagtggaggatcaactttcagtgacattccaaatgggcagtggatgacc
cagtcatttacagaccagattccttcctttaataatcactgtgggatgcaagaacaggaa
gaaggaaaccatgcttaa |