KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112391036
Entry
112391036         CDS       T08872                                 
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112391036 (TDG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nasi03400]
    112391036 (TDG)
Enzymes [BR:nasi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     112391036 (TDG)
DNA repair and recombination proteins [BR:nasi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     112391036 (TDG)
SSDB
Motif
Pfam: UDG CDC27
Other DBs
NCBI-GeneID: 112391036
NCBI-ProteinID: XP_024587900
UniProt: A0A341AB80
LinkDB
Position
Unknown
AA seq 405 aa
MEAENAGSCSLQHAQAFYTFPFQQTMAEVPMAVMNEQEMPEVPAPAPAQEPTQETPKGRK
RKPRTTEPKTPVEPKKPTEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLP
GKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEV
FGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
ERNTDVQEVQYTFDLRLAQEDAKKMAVKEEKYDPGYEAAYGGAYSENPCGSEPCSFSSDG
LTADSGGSTFSDIPNGQWMTQSFTDQIPSFNNHCGMQEQEEGNHA
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggaagcggagaacgcaggcagctgttcccttcagcacgcgcaagctttttatacattt
ccattccaacaaacgatggctgaagttcctatggcagttatgaatgaacaagaaatgccg
gaagttccagccccagctcctgctcaggaacccacacaagaaactccaaaaggaaggaaa
agaaaacccagaacaacagaaccaaaaacaccagtggaacccaaaaaacccactgaagcc
aaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagacacattt
aaagtgaaaagaaaagtagaccggttcaatggtgtttcagaagctgaacttttgaccaag
actctaccggacattttgaccttcaatctggacattgtgattattggcataaacccagga
ctaatggctgcttacaaagggcatcattaccctggacctggaaaccatttttggaagtgt
ctgtttatgtcagggctgagtgaggtccaactgaatcacatggatgatcacactttacca
ggaaaatatggtattggatttaccaatatggtggaaaggacaacaccaggcagcaaggat
ctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacagaaatat
cagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaggaagtt
tttggagtaaaagttaagaacttagaatttggacttcaaccgcataagataccagacaca
gaaacgctctgctatgttatgccatcatccagtgcaagatgtgctcagtttcctcgagcc
caggacaaagttcattactacattaagctgaaagacttaagagatcagttgaaaggcatt
gagcgaaacacagacgtccaagaggtgcaatatacatttgacctgcggctagcccaagag
gatgcaaagaagatggctgtgaaggaagaaaagtatgatccgggttatgaagcagcgtac
ggtggtgcttatagtgaaaatccgtgcggtagtgaaccttgcagcttctcttcagatggg
ctgacagctgacagtggaggatcaactttcagtgacattccaaatgggcagtggatgacc
cagtcatttacagaccagattccttcctttaataatcactgtgggatgcaagaacaggaa
gaaggaaaccatgcttaa

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