Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398942
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Entry
112398942 CDS
T08872
Symbol
PTCD3
Name
(RefSeq) pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nasi03029
]
112398942 (PTCD3)
Mitochondrial biogenesis [BR:
nasi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112398942 (PTCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
DUF6047
RPM2
PPR
HMUDK_hel
FH3_FHOD1-3
Xpo1
Motif
Other DBs
NCBI-GeneID:
112398942
NCBI-ProteinID:
XP_024599573
UniProt:
A0A341BD13
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAAVPSARWLKVRRGLCLLLTGRRAGLCGRDPSSRFYSGSAAVPEVEGAGATGTEEVVIP
KKKTWDKVAVLQALASTVHRDATAAPYAFQDDPYLIPTSAMESHSFLLAKKSGENAAKFI
INSYPKYFQKDIAEPHIPCFMPEYFEPQIEDISEAALQERIKLRKVKASVDMFDQLLQAG
TTVSLETTNSLLDLLCYYGNQEPSTNYNFQQREQAEELEEATEGSNEKPKKKAGHQLGVP
WRAKNNAERIFALMPEKNAHSYCTMIRGMVKHRAPMQALNLYTELLNNRLRADVHTFNSL
IEATAFVANEKLEEKWNNILDLLKQMVAQNVKPNLQTFNTILKCLRRFHAIGKLPALQTL
REMKAIGIEPSLATYHYIIQLFYQHENPSKGSSLIIYDIMNELTGKKFSPKDPDDDMFFQ
SAMRVCSSLRDLELAYQVHDLLNTGDNRKFIGPDHRRNFYYSKFFGLLCLMEQIDVTLKW
YKDLIPSVFFPHSQTLIDLLQALDVANRLELIPQIWKDSKEYGHTFRRDLKEEILMLMAR
DRHPPELQVAFADCAADIKSTYESQDARQTAPSWLASSLNHIAVLFLRAGRTQEAWKMLG
LFRKHNKIPGNELLNEFMDSAKASGSAAQAIEIVKLAGAFSLPICESLTQRLMADFTLSQ
EQKEALGDLTALTSDSDSDVGEGK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtaccttcggctcggtggctgaaggtccgccgcgggctttgcctactgctg
acgggtcgacgggcaggtctctgcggacgggaccccagtagcagattttattctggaagt
gcagccgtcccagaggttgaaggagctggtgcaacagggactgaggaagtggtcattcca
aaaaagaaaacttgggataaagtggctgttcttcaggcacttgcatccacggtacacagg
gatgctacagctgccccttacgcatttcaagatgatccttatctcataccaacatccgct
atggaatctcattcatttttgttggcaaagaagtccggggagaatgcagcaaagtttatt
attaattcatatcccaaatattttcagaaagacatagctgaacctcatataccgtgtttt
atgcctgagtactttgaacctcagattgaagatataagtgaggctgctctgcaggaacga
atcaagctcagaaaagtcaaagcttctgtggacatgttcgatcagctcttgcaagcagga
accaccgtatctctggaaacaactaacagtctcttggacttattatgttactatggtaac
caagagccctcaactaattataattttcaacaacgtgaacaagcagaagagttggaagag
gccacagagggaagtaacgagaaacctaagaagaaggctggtcatcagcttggagttcct
tggagagcaaaaaacaatgctgagagaatctttgctctaatgccagagaaaaacgcacat
tcctactgcacaatgatccgaggaatggtgaagcaccgagctcctatgcaggcattaaac
ttgtacactgaattattaaacaacagacttcgtgctgatgtacacaccttcaattcattg
attgaagcaacagcattcgtggcgaatgagaaattagaagaaaaatggaataatatattg
gacctgttgaaacaaatggttgcacagaacgtgaaacccaacctacagacttttaatact
attctgaaatgtctccgacgatttcatgcaattggaaaactgccagccttacagacctta
cgggaaatgaaagccattggaatagagccctcgcttgcaacgtatcactatattattcag
ctgttttatcaacatgaaaacccttcaaaaggatcgtccctcatcatctatgacatcatg
aatgaattaacgggaaagaaattttctccaaaggacccggatgacgatatgttttttcag
tcagccatgagggtttgctcatctctcagagatctagaacttgcttaccaggtccatgac
cttttaaacactggagacaaccggaaattcattggaccggatcatcggcgtaatttctac
tattccaagttctttggtttgctttgtctaatggaacaaattgatgtcaccttgaagtgg
tataaggacctgataccttcagtattctttccacattcccaaacactgatagatcttctc
caagcattagatgtggccaatcggctagaattgattcctcagatctggaaagatagtaaa
gaatatggtcatacttttcgccgtgacctaaaagaagagattctgatgcttatggcaagg
gatcggcacccaccagagctgcaggtggcgtttgctgactgtgctgcagacatcaaatcg
acttatgaaagccaggatgccagacagacggctcccagttggctggccagctctctgaac
cacatagccgtcctcttcttgagggccgggagaacccaggaagcctggaaaatgctgggg
cttttcaggaaacataataagatccctgggaatgagttgctgaatgagtttatggacagt
gcaaaagcatccggcagcgctgcccaggccattgagatagtgaagctggcaggtgccttc
agcttacctatttgtgagagcctcacccagagactaatggctgacttcaccctcagccag
gagcagaaggaagccctgggagatctaactgcattgaccagtgacagcgacagtgacgtc
ggtgaaggcaaataa
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