Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112405423
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Entry
112405423 CDS
T08872
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04140
Autophagy - animal
nasi05014
Amyotrophic lateral sclerosis
nasi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112405423 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112405423 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
112405423 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112405423 (SMCR8)
Membrane trafficking [BR:
nasi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
112405423 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
112405423
NCBI-ProteinID:
XP_024609572
UniProt:
A0A341C6L3
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPFASQGASPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLRQIRSYPHRKLRGPNLCPGETAHTQDPPSQAATTSDPEESADTDHYTCRP
TYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHIFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDLVEVDGRGEEKQESARPKPSHGRPPSRSVEECPVPQVLISVGSYKS
SVESVLIKMEQELGEEGSREVEVTESSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKS
TSVLSKSDSQASLTVPLSPQVVRSKAVSHRTISGDSIEVLSTCPSEALIPDDFKASYPSA
INEEESYADDGGGAIHFQAGLSPPELGEAEEGGSGVTPSQTDSCCIGREGGTLRVPLSTP
GHALSDEYGVVSVPPQRYRQKDQEFHMDFSVENANASSRDSGSEGFPAYELDPSHLLASR
DGSKTSLDDHSDATSYGSSVISASSDRTPSSVPPTGPSSERHKKRAGQNALRFIRQYPFA
HPAIYSLLSGRTLVILGEEEAAVRKLVTALSIFVPSYSLHAKPVKHWVSSPLHITDFQKW
KLIGLQRVASPASAGTLHALSRYSRYTSILDLDRKTLRCPLYRGTLVPRLADHRTHIKRG
STYSLHVQSVLTQLCAKAFLYAFCRHLHLPARGTEAEGLAASRQASFLQLNLGLVNEDVK
VVQYLAELLKLHYTREPSAAGQPVLRFDYVPSFLYKI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagaggacgaatacgaggaggaacct
tacaatgagccggccctgcccgaggagtactcggtgccgctcttccccttcgccagccaa
ggagccagtccatggtccaaactgtccggggccaagttctctcgggacttcatccttatt
tccgagttctctgagcaggtgggaccccagcccttactgaccatccccaatgacaccaaa
gttttcggtacttttgatctcaattacttctctttgcggatcatgtctgtggattaccag
gcctccttcgtgggccatccccctggttctgcctaccccaagctgaacttcgtggaggat
tccaaggtcgtgctgggagactccaaggagggggcctttgcctacgtgcaccacctcacc
ctgtacgacctggaggcccgtggcttcgtgaggcccttttgtatggcttatatctcagca
gaccagcacaaaatcatgcagcagttccaggagctctcagctgaattttccaaagcttca
gagtgcttgaaaacaggcaacaggaaggcatttgctggggaacttgaaaaaaaactgaaa
gacctggattacaccaggacagtgttgcacaccgagacagagatccagaagaaagccaac
gacaaaggtttttactcatctcaggccatcgagaaggccaatgagctggccagtgtggag
aagtccatcattgaacatcaagacctgctgaggcagatccgctcgtaccctcatcggaag
ttgagggggcccaatttgtgtcctggggagacggcgcacacccaggatccgcccagccag
gcagccactacctctgaccccgaagagtctgctgacacagaccattacacctgcagaccc
acctacaccccaaaactcatcaaagcaaagtccaccaagtgttttgacaagaagctgaag
accttggaagagctctgcgacaccgagtacttcacccagaccctggcccagctcagccac
attgagcacattttcagaggagacctgtgctacctcctgaccagccagatcgacagagca
ctcctgaagcaacagcatatcacaaacttcctctttgaagacttggtagaggtcgacggc
aggggggaagagaaacaggagagtgcacgccctaagcctagtcacggcaggccgccttcc
aggtctgtagaagaatgtccagttcctcaagtgttaattagcgtgggctcctacaagtcc
agtgtggagtccgtgctaatcaagatggagcaggaacttggggaggaggggtccagggaa
gtggaggtgacagagtcaagcagttttgacccccaggaaaacttggactacctggatatg
gacatgaaaggaagcatcagcagtggagagagcattgaggttcttggcacggagaagtcc
acctctgtgctgtctaagtctgacagccaggccagcctcacggtgcccttgagcccccag
gtggtccggagcaaggctgtcagccacaggacgatcagcggggacagtattgaagtcctc
agcacctgcccctctgaggccctcatccccgacgacttcaaggccagttacccaagtgcc
attaatgaagaagagtcctacgcagatgacggcgggggagccatccacttccaggcaggc
ctcagcccgccggagctgggggaggccgaggagggcggctcgggagtcaccccgtcacag
acagactcctgctgcattgggagggagggtggcactctgcgggtgccactctccaccccg
ggccacgcgctctctgacgagtacggggtcgtgagtgtccccccgcagcgctaccggcag
aaggaccaggagttccacatggacttctcggtggaaaacgccaacgcctcttcccgagac
agcggttccgaaggcttccctgcttatgagctggacccgagccacctgctggccagccgg
gacggcagtaagaccagcctggatgaccactctgacgccaccagctacgggagcagcgtc
atctccgccagctccgacaggactccctcttctgttcctcccactggcccctcttctgag
aggcataagaagagggcgggccagaacgccttaagattcatccgccagtacccctttgcc
cacccagccatctactccctgctcagcgggaggacgctcgtgatcctcggggaggaggag
gccgcagtcaggaagcttgtgaccgcgctgtccatctttgtccccagctacagcctccac
gccaagcccgtgaagcactgggtgtcctctcctttgcacatcacggattttcagaagtgg
aagcttattggtctgcagagggtggcgtcccccgccagtgccggcaccctccacgccctg
agccgctacagccgctacacaagcatcctggacctggaccggaagaccctgcgctgcccc
ctctacagaggcaccctggtgccccggctggcagaccaccgcacacacatcaagcggggc
agcacctactccctgcacgtgcagagtgtgctcacgcagctctgcgccaaggccttcctc
tatgccttctgccgccacctgcacctgcctgcccgcggcacggaagctgaggggttggcc
gccagccgccaggccagcttcttgcagctgaacctggggctggtgaacgaagacgtcaag
gtggtccagtacctggcagagctgctgaagctacactacacgcgggagccttccgcagcc
ggccagcccgtgctcaggttcgactacgtccccagtttcctgtacaagatctga
DBGET
integrated database retrieval system
