Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112412047
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Entry
112412047 CDS
T08872
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi00514
Other types of O-glycan biosynthesis
nasi04330
Notch signaling pathway
nasi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112412047 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112412047 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112412047 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nasi01003
]
112412047 (LFNG)
Enzymes [BR:
nasi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
112412047 (LFNG)
Glycosyltransferases [BR:
nasi01003
]
Glycan extension
O-Glycan
112412047 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
112412047
NCBI-ProteinID:
XP_024619274
UniProt:
A0A341CX23
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MERGRKDVPRGTIEPEVPVPESPSQRRGRAPPYVRRRVYLQPALASLGFPFRATGAGRTY
IPTPPRCPPGRSGRGGAGRARADRGREPKTPARQFPDPRRGPTWALQSIWGNLERPRPRA
REPAERGRRALRSLAGPSGAAPAPGLEAAAAPGVLVREVHSLSEYFSLLTRSRRDAGPPP
GSVPRPADGHPRPPAEPLTPHDVFIAVKTTKKFHRARLDLLLETWISRHKEMTYIFTDGE
DEALARRTGNVVNTNCSAAHSRQALSCKMAVEYDRFVESGRKWFCHVDDDNYVNVRALLK
LLASYPHTQDIYLGKPSLDRPIQATERVSESKVRPVHFWFATGGAGFCISRGLALKMSPW
ASGGHFMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTL
SYGMFENKRNAVHIKGPFSVEADPSRFRSIHCHLYPDTPWCPHTAIF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggaaggaaggacgtcccccgcgggacgattgagcccgaagtccctgtccca
gaatccccgtcacagcgccgagggcgcgcccctccttatgtcagacgccgggtatatctc
cagccggcgctggccagcctgggtttccccttcagggccactggggcggggcggacctac
atccccacgccgccccgctgcccgccggggcgatccgggcggggcggggcggggcgtgca
cgtgcggaccgggggcgggagcccaagacgcccgctcggcagttcccagacccccgccgc
ggccccacgtgggctctgcagagcatctggggcaacctggagaggccccgccccagggcc
cgggagccagctgagcgcggtcggcgcgcgctgcgcagcctggcgggcccctcgggggcg
gccccagctcctgggctggaggcggcggcggcacccggggtgctagtccgcgaggtgcac
agtctgtccgagtacttcagcctgctgacccgctctcgtagagacgcgggcccaccgccc
ggcagcgtcccccgccccgcagacggccatccgcggcccccggccgagccactcacgccg
cacgacgtcttcatcgcggtcaagaccaccaaaaagtttcaccgcgcgcgcctcgacttg
ctgctggagacgtggatctcgcgccacaaggagatgacgtacattttcacggacggggaa
gatgaagccctggccaggcgcacgggcaacgtggtcaatactaactgctcggctgcccac
agccgccaggcgctgtcctgcaagatggccgtggagtatgaccgcttcgtcgaatcgggg
aggaagtggttctgccacgtggatgatgataactacgtgaacgtgcgggccttgctgaag
ctgctggccagctacccgcacacgcaggacatctacctcggcaagcccagcctggacagg
cccatccaggccacagagagggtcagcgagagcaaggtgcggcccgtccacttctggttt
gccaccggcggggctggcttctgcatcagccgggggctggccctgaagatgagcccttgg
gccagcggaggccacttcatgagcacggccgagcggatccggctgccggacgactgcacc
atcggctacatcgtggaggctctgctgggcgtgcccctcatccgcagcgggctcttccac
tcccacctggagaacctgcagcaggtccccacctccgagctccacgagcaggtgaccttg
agctacggcatgtttgaaaacaagcggaatgctgtccacattaaggggcccttctcagtg
gaggccgacccatccaggttccgctccatccactgccacctgtatccggacacaccctgg
tgtccccacactgccatcttctag
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