KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112414069
Entry
112414069         CDS       T08872                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04145  Phagosome
nasi04514  Cell adhesion molecules
nasi04612  Antigen processing and presentation
nasi04640  Hematopoietic cell lineage
nasi04658  Th1 and Th2 cell differentiation
nasi04659  Th17 cell differentiation
nasi04672  Intestinal immune network for IgA production
nasi04940  Type I diabetes mellitus
nasi05140  Leishmaniasis
nasi05145  Toxoplasmosis
nasi05150  Staphylococcus aureus infection
nasi05152  Tuberculosis
nasi05164  Influenza A
nasi05166  Human T-cell leukemia virus 1 infection
nasi05168  Herpes simplex virus 1 infection
nasi05169  Epstein-Barr virus infection
nasi05310  Asthma
nasi05320  Autoimmune thyroid disease
nasi05321  Inflammatory bowel disease
nasi05322  Systemic lupus erythematosus
nasi05323  Rheumatoid arthritis
nasi05330  Allograft rejection
nasi05332  Graft-versus-host disease
nasi05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112414069
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112414069
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    112414069
   04612 Antigen processing and presentation
    112414069
   04658 Th1 and Th2 cell differentiation
    112414069
   04659 Th17 cell differentiation
    112414069
   04672 Intestinal immune network for IgA production
    112414069
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    112414069
   05164 Influenza A
    112414069
   05168 Herpes simplex virus 1 infection
    112414069
   05169 Epstein-Barr virus infection
    112414069
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    112414069
   05152 Tuberculosis
    112414069
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    112414069
   05140 Leishmaniasis
    112414069
  09163 Immune disease
   05310 Asthma
    112414069
   05322 Systemic lupus erythematosus
    112414069
   05323 Rheumatoid arthritis
    112414069
   05320 Autoimmune thyroid disease
    112414069
   05321 Inflammatory bowel disease
    112414069
   05330 Allograft rejection
    112414069
   05332 Graft-versus-host disease
    112414069
  09166 Cardiovascular disease
   05416 Viral myocarditis
    112414069
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    112414069
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nasi04147]
    112414069
Exosome [BR:nasi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112414069
  Exosomal proteins of epithelial cells
   112414069
  Exosomal proteins of breast milk
   112414069
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 Ig_2 C2-set_2 C2-set_3 I-set
Other DBs
NCBI-GeneID: 112414069
NCBI-ProteinID: XP_024622144
UniProt: A0A341D5D9
LinkDB
Position
Unknown
AA seq 263 aa
MTALLPLLLGLSLGCTGAGGFVAHVESTCLLDDNGTPKGFTYCISFNKDLLTCWDPLQAS
MVPCEFGVLNGLAKYLSDYLNHKENLIQRLSNGLQDCATHTQPFWRSLTHRTRPPSVQVV
KTTPFNTRETVMLACYVWGFYPADVTIMWRKNGQLVLPHGSAHKTVQPNGDWTYQTVSHL
AITPSFGDTYTCVVEHISTLEPILQDWTPGLLPVQTVKVFTCAVTLGLGLVIFSLGLISW
RRAAYSGYVFLPGSNYPEGQHIS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgactgccctcctgccgctgctgctgggcctcagcctgggctgcaccggagcaggaggc
tttgtggcccacgtggaaagcacctgtctgctggatgacaatgggactccaaaagggttc
acatattgtatctccttcaacaaggatttgctgacctgctgggatcccctgcaggccagt
atggtcccttgtgaatttggggtactgaacggcttggccaaatacctctcagattacctc
aaccataaggaaaacctgatccaacgcttatccaacgggttgcaggactgtgccacacac
acccagcccttctggagatctctgacccacaggacacgaccgccatctgtgcaagtagtt
aaaaccactccttttaacacgagggagactgtgatgctggcctgctacgtgtggggcttc
tatccagctgatgtgaccatcatgtggaggaagaacgggcagctggtcctccctcacggc
agcgcccataagaccgtccagcccaacggagactggacataccagaccgtctcccatttg
gccataaccccctcttttggggacacctacacctgtgtggtagagcacattagcactctt
gaacccatccttcaggactggactcctgggctgttgccagtgcagacagtgaaggttttc
acgtgtgctgtgactctgggcctgggcctcgtcatcttctctcttggtttgatcagctgg
cggagagctgcctactccggctacgttttcctcccagggtccaattatccagaaggtcag
cacatttcctag

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