Nicotiana attenuata (coyote tobacco): 109214837
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Entry
109214837 CDS
T05870
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109214837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109214837
Transcription factors [BR:
nau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109214837
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Pepco
Motif
Other DBs
NCBI-GeneID:
109214837
NCBI-ProteinID:
XP_019234337
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Position
2:complement(90981979..91003678)
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AA seq
488 aa
AA seq
DB search
MNHSVPNFETDESTVVEEDVMELIWQNGQVTAQSQNQRSQTVAASARPLFIQEDEMATWL
QYPLEDSSFERDLYADFLYTTPSSSVVTAAEPTPGEIDTTTTEIRPNQPLPQLRCTEGKF
SHRLQNFGHFSRLSKAKSQNYTSSSGNTAWVSTIVDSNETPIAEFSRLSDKVAPVAAGND
GGKATSDTTTTAAETTSGREMSTTACEFTGTSSTSGSRGSVSASAEPPPLQPPQEAALMP
AEDRKRKGRERGMEDYEEHSEVDAEFESADAKKQTSSSTSTKRSRAAEVHNLSERKRRDR
INEKMKALQELIPRCNKSDKASMLDEVIEYVKSLQMQVQMMSRGYSMVPMMYPGAPQYMP
TMGMGMRMGMGTGMGMNRPMVPYPSLMPGTAMQNAAAVAQMTPRFPVPASVPVPDPSRIR
AANQPDHPMMNSLVGHNTNQPRLPNLSDPYQQYYALHQAQVLPQRVEQPSSSNPSSRIEG
SPANHQTG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactctgttcctaatttcgaaacggatgaatccacagtagtggaggaagatgta
atggagctaatatggcaaaatggacaagtaactgcccaaagccaaaatcaaagatctcaa
acggtagcagcttcagctcgaccactatttatacaagaggatgaaatggccacgtggctt
caatatccacttgaagattcttctttcgagcgtgatctctatgctgattttctctatact
acgccgagctcctctgttgtcaccgccgccgagccgacgccaggagagattgatactacc
acgacggagatccgtccgaatcagcctctgcctcaattgagatgtactgagggcaaattt
tcacatcgcttacagaatttcgggcatttctcacgattgtctaaagcaaaatcgcagaat
tatacatcgagttctggtaacacagcttgggtatcaacgattgtcgattcgaatgaaact
ccaattgcagaattttcacgcttatcggataaagtagcgccagttgccgccgggaatgac
ggaggaaaagccacgagtgatactactacgacggcggcggaaacaaccagcggcagggaa
atgtcgacgacggcatgtgagttcacggggacgtcatcgacaagtggctcgagaggtagt
gtaagtgccagtgcggaaccaccgccgctgcagcctccgcaggaggcggcgcttatgccg
gcggaggatcggaaacggaaaggaagagaaaggggaatggaggactatgaagaacacagt
gaggtggatgctgaatttgagtcagctgatgcaaagaagcaaaccagcagttctacatcc
acaaagagatctcgtgccgcagaggtccataatctttctgaaaggaaacgtcgagataga
ataaatgagaagatgaaggctctacaagaacttataccgcggtgcaataagtcagacaaa
gcttcaatgctggatgaagtgattgagtacgttaaatcattgcaaatgcaagtgcagatg
atgtccaggggatatagcatggtccctatgatgtatcctggagccccgcaatacatgcca
acgatgggaatgggtatgcgtatggggatgggtacgggaatgggcatgaaccggccaatg
gttccatatccatctctaatgccaggtacggcaatgcagaatgcagctgcagtagcacaa
atgactcctagatttcctgttccagcatcagttcctgtacctgatccgtccagaatccga
gcagcgaaccaaccagatcatccgatgatgaactcacttgttggacataatactaatcag
ccaagacttccaaatcttagtgatccatatcaacaatattatgctctacaccaggcacaa
gtgttaccacagcgagtggaacaacccagcagcagtaacccaagcagccgcatagaagga
agtccagcaaatcatcaaactggttga
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