KEGG   Nicotiana attenuata (coyote tobacco): 109217082
Entry
109217082         CDS       T05870                                 
Name
(RefSeq) ABC transporter I family member 20
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109217082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109217082
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109217082
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_15 AAA_29 AAA_23 AAA Arf Zeta_toxin AAA_28 ORC-CDC6-like
Other DBs
NCBI-GeneID: 109217082
NCBI-ProteinID: XP_019236857
UniProt: A0A1J6K0G8
LinkDB
Position
Unknown
AA seq 328 aa
MAVKEDRKPSVEINKLKFTYPGIDGHPPPGSTPLIEDFSLTLYPGDRCLLVGSNGAGKTT
ILKILGGKHMVEPDMVRVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDIS
AEKMIFGVPGTDPQRRDELIKVLGIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLSKECEERGATIIYATHIFDGLENWPSQMLYVAHGKLQLAMPMDK
VKEISNMSLMRTVESWLRKERDEERKRRKERKAEGLPEYGKQVEGSRVVGDPARAAARPL
NNGWAGGRLNSTIAGEENFVLSSNRVLR
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggtgaaggaagacaggaagccatcggtagagatcaacaagctcaaattcacctac
cctggtatcgatggtcaccctccccccggatctacgcccttaattgaagatttctcactt
accctctatcctggtgaccgctgccttcttgttggatccaatggcgcagggaagactaca
attctgaagatattgggaggaaagcacatggtagaaccagacatggtcagagtgcttgga
agatctgcatttcatgacactgctttaacttcttctggagacctcagctatcttggtgga
gagtggaggagagaagttgcatttgctggatttgaggtgcctattcaaatggatatttct
gcggagaaaatgatttttggggttccaggaactgacccacaaagacgagatgaattaatt
aaggttcttggtattgatctatcctggagaatgcataaagcatctgatgggcaaagaaga
agagtgcagatctgtatgggtctcctgaaaccattcaaggttcttcttcttgacgagatt
acagttgacctagatgttcttgcgagggctgatcttttgaaatttctgagcaaagaatgt
gaagagcgaggcgctactataatttatgcaacacatatttttgatggtcttgagaattgg
ccttctcaaatgctatatgtggctcatgggaagttgcaactagcaatgccaatggacaag
gtgaaggagatcagcaatatgtcattaatgaggacagtagagagttggctgaggaaagaa
agagacgaggagaggaaaagaaggaaagagagaaaggcagagggccttccagagtatgga
aaacaagtcgagggcagtcgagtggttggggatccagctcgtgctgctgctcgtccatta
aacaacggttgggctggtggaaggctaaattctactattgctggtgaagaaaattttgtc
ttaagctcgaaccgtgttctaagataa

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