Nicotiana attenuata (coyote tobacco): 109217082
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Entry
109217082 CDS
T05870
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109217082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109217082
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109217082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_23
AAA
Arf
Zeta_toxin
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
109217082
NCBI-ProteinID:
XP_019236857
UniProt:
A0A1J6K0G8
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MAVKEDRKPSVEINKLKFTYPGIDGHPPPGSTPLIEDFSLTLYPGDRCLLVGSNGAGKTT
ILKILGGKHMVEPDMVRVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDIS
AEKMIFGVPGTDPQRRDELIKVLGIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLSKECEERGATIIYATHIFDGLENWPSQMLYVAHGKLQLAMPMDK
VKEISNMSLMRTVESWLRKERDEERKRRKERKAEGLPEYGKQVEGSRVVGDPARAAARPL
NNGWAGGRLNSTIAGEENFVLSSNRVLR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggaagacaggaagccatcggtagagatcaacaagctcaaattcacctac
cctggtatcgatggtcaccctccccccggatctacgcccttaattgaagatttctcactt
accctctatcctggtgaccgctgccttcttgttggatccaatggcgcagggaagactaca
attctgaagatattgggaggaaagcacatggtagaaccagacatggtcagagtgcttgga
agatctgcatttcatgacactgctttaacttcttctggagacctcagctatcttggtgga
gagtggaggagagaagttgcatttgctggatttgaggtgcctattcaaatggatatttct
gcggagaaaatgatttttggggttccaggaactgacccacaaagacgagatgaattaatt
aaggttcttggtattgatctatcctggagaatgcataaagcatctgatgggcaaagaaga
agagtgcagatctgtatgggtctcctgaaaccattcaaggttcttcttcttgacgagatt
acagttgacctagatgttcttgcgagggctgatcttttgaaatttctgagcaaagaatgt
gaagagcgaggcgctactataatttatgcaacacatatttttgatggtcttgagaattgg
ccttctcaaatgctatatgtggctcatgggaagttgcaactagcaatgccaatggacaag
gtgaaggagatcagcaatatgtcattaatgaggacagtagagagttggctgaggaaagaa
agagacgaggagaggaaaagaaggaaagagagaaaggcagagggccttccagagtatgga
aaacaagtcgagggcagtcgagtggttggggatccagctcgtgctgctgctcgtccatta
aacaacggttgggctggtggaaggctaaattctactattgctggtgaagaaaattttgtc
ttaagctcgaaccgtgttctaagataa
DBGET
integrated database retrieval system