Nicotiana attenuata (coyote tobacco): 109220074
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Entry
109220074 CDS
T05870
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00906
Carotenoid biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
109220074
Enzymes [BR:
nau01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
109220074
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Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
109220074
NCBI-ProteinID:
XP_019240081
UniProt:
A0A1J6K659
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All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MECIGARNFATMAVFTCPRFKSLGRRRIMPRKKQPFWPIHMKVKCSGSESCVVVKEDFAD
EEDYIKAGGSELVFVQMQQNKDMDLQSKLSDKLRQISSAGQTILDLVVIGCGPAGLALAA
ESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDADPILIGRA
YGRVSRHLLHEELLKRCVEAGVLYLNSKVDRIVESTSGHSLVECEGDIVIPCRFVTVASG
AASGKFLQYELGGPRVSVQTAYGVEVEVDNNPYDPSLMVFMDYRDYVRHDAQSLEAKYPT
FLYAMPMTKTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGIKIKKIYEEEWSYIPVGG
SLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQNHVKNMVTSSSTT
SISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLGSSL
SSADLMLFAFYMFIIAPNDMRKGLIRHLLSDPTGATMIRTYLTF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtattggagctcggaattttgctacaatggcggtttttacgtgtccgagattc
aaatcattaggaagaaggagaattatgccaagaaaaaagcaaccattttggcctatacat
atgaaagtgaagtgtagtggaagtgagagttgtgtagtagttaaagaagattttgctgat
gaagaagattatataaaagctggtggttcagaacttgtttttgttcaaatgcagcagaat
aaagacatggatctgcagtctaagctttctgataagttgcgacaaatatcatcagctgga
caaactatactggatttggtggtcattggctgtggtcctgctggtcttgctcttgccgcg
gagtctgctaaactcgggttgaacgtggggctcgttggtcctgatcttcctttcacaaat
aactatggtgtttgggaggatgagttcaaagatctcgggcttcaagcatgcattgaacat
gtttggagggataccattgtatatcttgatgatgccgatccaattcttattggtcgtgct
tatggaagagttagtcgccatttattgcacgaggagttactcaaaaggtgtgtggaggca
ggtgttttatatcttaactcgaaagtggataggatcgttgagtccacaagtggccacagt
cttgtagaatgcgagggcgatattgtgattccctgcaggtttgtcactgttgcatctgga
gccgcctccgggaaattcttgcaatatgagttgggaggtcctcgggtttctgtacaaaca
gcttatggagtggaagttgaggtggataacaatccatatgatccaagcctgatggttttc
atggattacagagactatgtcagacacgacgctcaatctttagaagctaaatatccaaca
tttttatatgccatgcccatgactaaaacaagagtctttttcgaggaaacttgtttggct
tcaaaagatgcaatgccatttgatctgttaaagaaaaaactgatgttacgattgaacaca
ttgggcataaaaattaaaaaaatctacgaggaggaatggtcttacataccagttggtgga
tcgttgccaaatacagagcagaaaacacttgcgtttggcgctgctgctagcatggttcat
ccagctacaggttattcagttgtcagatcactgtccgaggcgccaaaatgcgcctccgta
cttgctaatattttaagacaaaatcatgtcaagaacatggttaccagttcaagtaccaca
agtatctcaactcaagcttggaacaccctttggccacaagaacgaaaaaggcaacgatcg
tttttcctatttggattggcactcatattgcagctggatattgaggggattaggtcattt
ttccgcgcattcttccgtgtgccaaaatggatgtggcaaggatttcttggctctagtctt
tcatcagcagacctcatgttatttgccttctacatgtttattattgcaccaaatgacatg
agaaaaggcttaatcagacatctgttatctgatccaactggtgcaactatgataagaaca
tatcttacattttag
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