Nicotiana attenuata (coyote tobacco): 109225596
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Entry
109225596 CDS
T05870
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03420
Nucleotide excision repair
nau04120
Ubiquitin mediated proteolysis
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109225596
04120 Ubiquitin mediated proteolysis
109225596
09124 Replication and repair
03420 Nucleotide excision repair
109225596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109225596
03400 DNA repair and recombination proteins [BR:
nau03400
]
109225596
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109225596
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109225596
Multi subunit type E3
SCF complex
Ring finger protein
109225596
Cul2 complex
109225596
Cul3 complex
109225596
Cul4 complex
109225596
Cul7 complex
109225596
Cul8 complex
109225596
Cul9 complex
109225596
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109225596
TCR (transcription coupled repair) factors
Cul4-CSA complex
109225596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109225596
NCBI-ProteinID:
XP_019245859
LinkDB
All DBs
Position
5:complement(31006995..31013112)
Genome browser
AA seq
120 aa
AA seq
DB search
MASVDTDVTMVPAGEGSTGAGASSSSSTKKAKRFEIKKWNAVSLWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtcgacaccgacgtgactatggttccggccggcgagggttctaccggtgcc
ggagcttcatcatcatcttccactaagaaggccaagcgttttgagataaaaaagtggaac
gctgtctctctatgggcttgggatattgtggtcgataactgtgctatctgtaggaaccac
atcatggatctctgtattgaatgtcaagctaatcaagctagtgcaacaagtgaggaatgc
acagtggcttggggagtttgcaaccatgcgttccacttccactgcattagtaggtggctc
aagactcgtcaagtctgtcctcttgacaacagtgagtgggagtttcagaaatatggtcac
tag
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