Nicotiana attenuata (coyote tobacco): 109228555
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Entry
109228555 CDS
T05870
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor 4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109228555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109228555
Transcription factors [BR:
nau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109228555
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
DUF1207
bHLH_LHW
bHLH_NPAS4
DcuC
Motif
Other DBs
NCBI-GeneID:
109228555
NCBI-ProteinID:
XP_019249229
UniProt:
A0A1J6IM69
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Position
7:complement(3945052..3949483)
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AA seq
484 aa
AA seq
DB search
MNPCLPEWNIEAELHVPHQKKPMGFDHELVELLWRNGEVVLHSQKHKKQQGYDPNECRQF
NKHDQQTIRDVVSCGNHTNLIQDDETISWLDCPIDESFEKEFCSPFLSEISTNPLETDKS
IRQSEDNKAFKFDPLEINHIFPHSHHSSFDPNPMPPPRFHNSVSAQKSVRNNVKEGSVMT
VGSSHCGSNQVAIDADTSRFSSNANIGLSAAMITDYTGKVTPQSDTMDRDTFEPANTSSS
GGSGSSYARTCNLSAATNSQSLKRKSRDGEEPECQSKAGELEPAGGNKSAQKSGTARRSR
AAEVHNLSERRRRDRINEKMKALQELLPHSTKTDKASMLDEAIEYLKSLQMQLQMMWMGS
GMASMMLPGVQHYMSRIGMGMGPPTVPSIHNAMHLATLPLVDSTIPLNPAAPNQAAMCQN
SMLNSVNYQRHLQNPNFQDQYASYMGFHPLQGASQQMNIFGLGSQTAQQSQQLPHPTNTN
APNS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatgtctacctgaatggaatattgaggctgaactccatgttccacatcaaaag
aagccaatgggatttgatcatgagctagtggagctgttatggcgaaacggagaagtagta
ttacacagccaaaaacataaaaaacagcaaggctatgatcctaatgaatgcagacagttt
aacaaacatgatcaacaaacaataagagatgttgtctcctgtggaaatcacaccaatttg
attcaagatgatgaaactatctcgtggcttgactgccctatcgatgaatcgtttgagaaa
gaattttgttcccctttcttatctgaaatttcaacaaatccacttgagactgataagtca
attaggcaatcagaggacaataaggctttcaaatttgatccattagagatcaatcatatt
tttccacattcacatcattctagttttgatccaaatccaatgccccctccaagatttcac
aacagtgtatcagcacagaaaagtgttagaaacaatgttaaggaggggtctgtgatgaca
gttggttcaagtcactgtggtagcaatcaagttgccattgatgcggatactagccggttt
tcaagcaatgcaaatataggtttatctgcagcaatgatcactgactatactggtaaagtt
actccgcaaagtgatacaatggaccgagacacgtttgaaccagctaacacatcatcttca
ggcggatcgggtagtagttatgctagaacatgcaatctatctgcagcaaccaatagtcaa
agccttaaaaggaaaagtagagatggtgaagaaccagaatgccaaagtaaagcaggtgag
ctagaaccagctggaggaaacaagtcagcccaaaaatctggaactgcacgtaggagccgt
gctgcagaagtgcataacctctctgaaaggagacggagggatagaatcaatgagaagatg
aaggccttgcaagaacttcttcctcactctactaagacagataaagcatcaatgctggat
gaagctattgaatacttgaagtcacttcagatgcaacttcagatgatgtggatgggaagt
ggcatggcatcaatgatgcttcctggtgtccaacactacatgtccagaataggaatgggg
atgggtccgccaacggtgccttccattcacaatgccatgcatttagctacgcttcctttg
gttgattcaacaattcctttgaatccagctgctcctaatcaagctgcaatgtgccagaat
tcaatgttgaattcggttaactatcaacgccatttgcagaatcccaactttcaagaccaa
tatgccagttacatggggttccatccacttcaaggtgcttctcagcaaatgaacattttt
ggcttaggttcacaaacagcacagcaaagtcagcagttaccacatcctactaatactaat
gcacccaacagttga
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