Nicotiana attenuata (coyote tobacco): 109231428
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Entry
109231428 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109231428
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109231428
03400 DNA repair and recombination proteins [BR:
nau03400
]
109231428
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109231428
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109231428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109231428
NCBI-ProteinID:
XP_019252637
LinkDB
All DBs
Position
1:101801792..101824163
Genome browser
AA seq
1629 aa
AA seq
DB search
MQENKMSSKRQSEDFSAETPRKKPTRALRIQTDSDEEVGIEEKVCYFRVLLPNGITLELQ
VPEPPTEMPVEDFIIVVKRECIKVGGRTEFGLKSKRQIYWTSKDLHFVDAFENKITKTLD
FRNFKPNYKSHMLRLCDGSAEADKYENMWDLTPDTDLLKELPEEYTFETALADLIDNSLQ
AVWSNHANQRRLISLELTEKRITIFDTGPGMDGSAENSIVKWGKMGASLHRSLRYRGIGG
KPPYLMPFFGMFGYGGPIASMHLGRRASVSSKTKESKKVFVLHLERESLISCSSSQHTWR
TDGSVRDPLEDEIRESTDGSFTKVEIFHPKMRSESIQQLQYKLKDIYFPYIQCDEVSNTG
RTIMPIEFQVNGTNLAEIEGGEVATTNLKSCNGPEFVLQLRFHVNDTNVKVGSGKRSPLE
ANARLKCVYLPVVQGKESIEVILEKLEADGYGITENFESFSHVSVRRLGRLLPDCRWTWL
PFMEPKLRKGDKAEVLKRCCFRVKCFVETDAGFNPTPSKTDLAHHHPYTIALRNFGNKPS
EKEKDIHVEISKDGKKVTLLQVEKQYQDWIIQMHERYDEEVDCGEDQPTFVLSPSHKKEL
GVSSDVMRIHKVLRRKGITWKSGQKIKILKGACRGFHKNNVFATLEYIILEGCQGESGGE
ARIICRPLNVPAENGSRLIVDKGCASIEIRDSKSLPISVIDTGKCLSVDITEWENQILKQ
QEKSTPSSIDILNAKQCEDLGIEGALPQDVVDAGHEPPEEIVAVVRPASFSSITASASLD
QKYIMKENFQMTLEVKFEAEADRKQLGHIYSGRLTPSSRKGFNGLYIFPLKEKFPEIFQK
AGVYLFQFSLQDSCTNFEKEVRVKALSEAASWKLISDGKTTLNVRVGSFFPEFLCVACYD
RFSNRIPFKLHTKIKMKLSSSANVVESKCHYDQFISRDRYTMKFKNVIIETSDLDKIRPS
YEATLHICSKDDPVLAAIPCTVIPGPLQRVLLHPVDFGKKLVPGMIIKELALETFDKYGN
HMRKDEHIKLMLEGLCLLEKGDCFLKVDIHGCVNLDGTLKVTAGYGRPVFLSIFSGDDVV
LKKEFQTEERWLRVASKVPKVCAAGSHLEDIVFEVINSAGEVDEDIHDEEENGHSHTLLI
RQDTLRGEDNVKYSFYHGRCIVRSVPLPKNEGLFCFVASHSRFHELQTSIEVHVEKAVND
EHEIPQPRNRKKELMLLEDSYYSKAPGIVYDHTYDDFSDGSILLLKDPCASAELEGRLQN
QLEKKLVDDICKCGLSINKCDANLEILRFRESNIVLEMSNLGAKIGPDSFHDLGYNRNMV
VERIEGKADTAAAVVHKLLRSPISKQLHLQYANDILGVVALLGEVQTHKLSSMFSAYLGE
DQMLAVVCKSRAAARALEKYQMDGNVNCASPLDILAAKLGISINGRYLVICLEDIRPYTR
GVSSDLQRELALPLPTLSNGETPPGFVGYAVNMIFPPAEHLQLRTASGHGLRETLFYRLL
GKLQVYESREHLYMASSCIEDGAVSLDGGMMRGNGVVSVGFGEPYILFPVICPESQLPLS
SDRVEILKQLEEKKLELSRMQDQIKDENRRREKYTRKLAKKLEYKKQIEELGSPPGMYST
DMYISSAPP
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaacaaaatgtcgagcaaaagacagagtgaagatttttcagcagaaacgcca
aggaagaaaccaactagggctctaagaatccaaactgattcagatgaggaagttggtatt
gaagaaaaagtttgttattttcgggttctgttgccaaatggtataactttggagttgcaa
gtacctgaaccgcccactgaaatgccggttgaggactttatcattgtagtgaagcgagaa
tgcataaaagttgggggaagaacagagttcggcctgaagtccaaaagacagatttattgg
acgagcaaggatttgcattttgtagatgcttttgagaacaagataacaaagacgttggat
ttcaggaattttaagcctaattacaagtctcatatgttaaggctttgtgatggttcagcc
gaagcagataaatatgagaatatgtgggatcttacgccggatactgatttgttgaaggag
ctacccgaagaatatacttttgaaactgcacttgcagatttgattgataattcattgcag
gctgtatggtctaatcatgcaaaccagaggagattaataagtctagagttaactgagaag
aggatcacaatatttgacacaggccctggtatggatggaagtgctgaaaactctatagtc
aagtggggaaagatgggagcttctcttcatagatcattgagatacagaggcataggagga
aaacctccatacttaatgcctttctttggtatgtttggttatggaggacctattgcatct
atgcatttgggaagacgagcctcagtttcttcaaagacaaaggagtctaagaaagtattt
gtgttacatcttgagagagaatctctgattagctgttcttcttctcaacacacttggagg
accgatggaagtgttagagaccccttggaagatgagattcgagaatcaactgatggtagc
ttcactaaagttgaaatttttcatccaaagatgagaagcgaaagcatacagcagttacaa
tacaaactgaaggatatatacttcccttatattcagtgtgatgaagtgtcaaatacagga
agaaccataatgcctattgagtttcaggtcaatggcactaatttagcagaaattgaaggt
ggagaggtggcaaccacaaacttaaagtcctgcaatggtcctgagtttgtattacaactt
agatttcatgtaaacgataccaatgtaaaagttggttcaggaaagagatcacccctagaa
gcaaatgctcgcctgaagtgtgtttatcttccagtggtgcagggtaaagagagtattgag
gtgatattggaaaagctagaggcggatggatatggaattacagagaattttgaaagtttt
agtcatgtttctgtccggcggttgggtcgtctacttccagattgtcgatggacttggctt
cccttcatggaacctaagctaagaaagggtgataaggctgaagtcttgaagagatgctgc
tttagagtaaaatgttttgtagagacggatgctggtttcaacccaacaccatcaaagact
gacttagcccatcaccatccttacaccattgcattaaggaactttggcaacaagccttct
gagaaagagaaagatattcatgttgagatatccaaagatggaaaaaaggtgactctcttg
caagtggagaagcaatatcaggactggataattcagatgcatgagcgctatgatgaggag
gttgactgtggagaggatcaacctacttttgtactcagcccttcgcacaagaaagagctt
ggtgtttcttcagatgttatgagaattcataaagttttacgaaggaaaggaataacttgg
aaatcagggcagaagattaaaattttgaagggagcttgtaggggtttccacaagaacaat
gttttcgccacattagaatatattattcttgaaggatgtcagggggaatcaggtggcgag
gctcgaattatctgcaggccattaaacgtccctgctgagaacggttctcgccttatagtt
gataaagggtgtgctagcatagaaatccgtgactcaaaatctttgccgattagtgtgatc
gacaccggaaagtgcttatctgttgatattacggaatgggagaaccaaatcttgaaacag
caagagaaaagcactccatcgtcaattgacatcttaaatgccaagcaatgtgaagacttg
ggcattgagggggcactacctcaggatgttgttgatgctggacatgaacctcctgaggag
attgttgccgttgttcgtccagcttcttttagttctattactgcatccgcaagtttggat
cagaaatacatcatgaaagaaaattttcagatgactctagaggtcaaatttgaagcagaa
gcggacaggaaacaacttggtcatatttactctggccgattgactccttcgtcgcgtaaa
gggtttaacggtctatatatattccccctgaaggagaagtttccagagatatttcagaaa
gcaggcgtttacctatttcaattttctcttcaagacagttgtacaaattttgaaaaggaa
gtgcgtgttaaagcattgtccgaggctgctagttggaaacttataagtgatgggaagact
acactcaatgtaagggttggttctttttttccagagtttttgtgcgttgcatgttatgat
agattttccaatcgtattccattcaagttgcacacaaagataaagatgaagttaagttct
agtgccaatgttgttgagtccaagtgccactatgatcaattcatttcacgtgacagatat
acgatgaagtttaagaatgtaattattgaaactagtgacttggataagattcgaccaagt
tatgaagctaccttacatatatgttcaaaggatgacccggttttagcagctattccttgt
acagttattcctggacctttgcaacgcgtccttctgcatcctgtagattttggcaagaaa
ttggttccaggaatgatcattaaggagcttgctttggagacatttgacaagtatggtaat
catatgagaaaagatgagcacatcaagctgatgctggaaggattatgtttactagaaaaa
ggagattgctttctgaaggtggacattcatgggtgtgtaaaccttgatggaaccttgaag
gttacagcaggatatggtagacctgttttcctttctattttttctggcgatgatgtagtt
ctcaagaaagagttccaaactgaagagagatggttgcgagttgcatccaaggtacctaaa
gtttgtgccgctggttctcatttggaagatattgtctttgaggtcataaattctgctggt
gaagtggatgaagatatccatgatgaagaggaaaatggccactctcatacgcttctgata
aggcaggacacattgaggggagaagacaatgtgaaatacagcttctatcatggacgctgc
attgtccgctccgttcctcttccaaagaatgaagggcttttctgttttgtagccagtcac
tctcgtttccacgagctgcagacaagcatagaggtgcatgttgagaaggcggtaaacgat
gagcatgaaattccccaacctagaaatcgaaagaaagagcttatgcttcttgaggattca
tattattcaaaagccccaggaattgtgtatgatcacacctatgatgatttttctgatgga
agtatattgctcttgaaggatccatgtgcttccgcagaactggaaggaagactacaaaac
caacttgaaaagaaacttgtggatgatatttgcaagtgtggtctaagcatcaacaagtgt
gacgcaaatctggaaatacttcgctttagggaatcaaatattgtgcttgagatgtccaac
ttgggagcaaagatcggtcctgattcttttcacgacttaggctacaatagaaacatggtt
gtggagaggattgaaggaaaggctgacactgcagctgctgttgtccacaagctcctcaga
tcaccaatatcgaaacagctacatcttcaatatgctaatgacatacttggtgtggttgca
ctgcttggagaggttcagacccataagcttagcagcatgttttcagcatatctaggagaa
gatcaaatgcttgctgtagtatgcaaatcccgtgcagctgccagagctcttgaaaagtat
caaatggatggaaatgtgaattgcgccagtcctcttgacatattagcagctaagcttgga
atttccatcaacggtcgatatttggttatatgccttgaggatataagaccatatacacga
ggagtcagcagtgatctccaacgagaacttgctcttccgctccctactttatccaacgga
gaaactcccccgggctttgtggggtatgcggttaatatgatatttcctcctgcagagcat
ttgcagttgagaactgcttcaggtcatggtcttcgcgagacattattttatcgcctgctt
ggtaagcttcaggtatacgagtctagagagcacctttacatggcaagttcctgcatagaa
gatggtgcggtttccttggatggtggaatgatgagagggaatggagttgtatctgttgga
ttcggggaaccatacattctatttccagtcatctgtccggaaagccagttaccactctct
tctgacagagtggagatattgaagcaacttgaagaaaagaagctggagctaagtcgaatg
caagatcagataaaggatgagaataggcgtagagaaaagtacacgaggaagttggccaaa
aagctcgagtataaaaagcagatagaagagttgggatctccacctggaatgtacagcact
gacatgtatatcagcagtgctcctccttga
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