KEGG   Nicotiana attenuata (coyote tobacco): 109233105
Entry
109233105         CDS       T05870                                 
Name
(RefSeq) 5'-3' exoribonuclease 3-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:nau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    109233105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109233105
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     109233105
SSDB
Motif
Pfam: XRN_M XRN_N Coilin_N
Other DBs
NCBI-GeneID: 109233105
NCBI-ProteinID: XP_019254413
UniProt: A0A1J6IFK7
LinkDB
Position
10:18875725..18895312
AA seq 817 aa
MGIPAFYRWLLERYPQSVVEVNEETPAVINGVTVPIDTSDPNPNGIEFDNLYLDMNGIIH
PCFHPEGLPAPETHEEVFKAVFKYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRARRFR
AAKDAGDEASDTGRIRGNDETEREDLSTKRLDSNVITPGTKFMELLSSALQYYIRLKVNV
DSGWQGIKVILSDASVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALASH
EVHFSILREDVRKDKSKYRGQQNRQDMYRQQAGRHSKKGEGCGKDLENLISEQKFQFLKV
WVLRDYLGYELQIPDPTVKLDLERLIDDFVFMCLFVGNDFLPHVPSLEISEGAIDLLIDV
YKKEFVNMGGYLTDSCQVNLERAGHFIQAIGSYENAVFRKRIQVQKHWGIHMQRPTLNLA
VQQNQDKSNHVQAKTLSVVDKVKLGEEGWKERYYLEKFEVQTEEDCVKIQRDAVLKYVEG
ICWVMHYYYQGVCSWQWFYPYHYAPFASDFHDLDRLKIHFTIGKPFKPFDQLMGVLPAAS
AQALPFSYRKLMTDPLSPILDFYPSDFELDINGKRHAWQAVCKLPFIEESRLLSEIANVE
DTLTVDEKHRNSLGLDMLFVYLSHPLATKIPAFCARNKDNPKLPKAKVKRKINPKFSHGM
NGFIYLSDKPVCPVEIYPPVEDMDVITDNKVISVFYKVPSFHPHIPKPPKGVIMPRKVIS
EDGVQPQPLLWHEKTAVAEHRYSRRYIPHNSVSGPRLAKLAHQLVSENCFLKHQVNGDGG
NDSHSKKRKKPRSADRKKRTGAERKKRKKQRQETVVC
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgggaatacctgcattctatcgttggttactggagcgttatccacagtctgttgttgag
gttaacgaagaaaccccagccgtcattaatggggtcactgtcccaattgacactagcgac
cctaatcccaacggcattgaattcgataatctctatttggatatgaacggaatcattcac
ccttgttttcatccagaaggcctgcctgccccggagacacatgaggaagtctttaaagcg
gttttcaagtacattgatagaatattttcaattgttaggcctcgcaagcttttatacatg
gcgattgatggtgttgcaccacgtgccaaaatgaatcaacagcgtgcgagacgtttcaga
gctgctaaagatgctggtgatgaagcctctgatacagggagaataagagggaatgatgaa
acagaacgggaagatttaagtactaaaaggttggattcaaatgttattacacctggaacg
aaattcatggaactgctgtcatctgcacttcaatactatatacgtttgaaagtgaatgta
gactctggttggcagggaatcaaggttattctctccgatgctagtgtgcctggtgaaggg
gagcataagataatgtcttatattcgcttgcaaaggaatcttccaggatttgatcctaat
acacggcattgcttgtatggtttggacgcagacttgataatgctggcattggcgtcacat
gaagttcacttttcaattctaagggaggatgtccgcaaagataaatcaaaatatagaggt
caacagaataggcaagatatgtatagacaacaagcaggtaggcactcaaaaaaaggggaa
ggatgcggcaaggacttggagaacttaatatcagaacagaagtttcagtttcttaaagta
tgggtactcagagattatttgggatacgaacttcaaattccagatccaactgtcaaacta
gacctggagcgactgatagatgattttgttttcatgtgtttatttgttggaaatgatttt
cttccccatgtgccatctttggagatatcagagggagccattgacttactgattgatgtc
tacaagaaggaatttgtcaatatgggtggctatcttactgattcttgccaggttaatttg
gagagggcggggcactttatacaagccattggttcttatgagaatgctgtctttaggaag
cgtatccaggtacagaagcattgggggatacacatgcaacgccctacattaaatttggct
gttcagcagaatcaggacaaaagtaaccatgtacaagccaagaccctttctgtggttgat
aaggttaaattaggagaagagggctggaaagagagatactatttggaaaaatttgaggtt
caaaccgaagaagattgcgtcaaaattcaaagggatgcggtcttgaaatatgttgaagga
atatgttgggtcatgcattattactaccaaggagtgtgctcctggcaatggttttatcct
tatcactatgctccatttgcatctgattttcatgatcttgaccgattgaaaatccacttc
acaattggcaagcccttcaagccttttgatcagctaatgggtgtccttccagctgcaagt
gcacaagcacttcccttttcttacaggaagttgatgacagatccattgtcccctatttta
gacttctatcctagtgattttgagcttgatatcaatgggaagaggcatgcttggcaggct
gtttgtaagctgccatttattgaagagagccgtcttctatctgagattgcaaatgttgaa
gatactttaacggttgacgaaaagcacagaaacagtctcggccttgatatgttgtttgtt
tacttgtcacatcctctagcaacgaagatccctgctttttgtgcaaggaacaaggacaat
ccaaagttgccaaaggctaaagtgaaaaggaaaatcaatcccaagttcagtcatggaatg
aatggattcatatatctttctgataagcctgtatgtcctgttgagatctatccacccgtt
gaggacatggatgtgataacagataataaagtcatatctgtgttttataaagtcccttct
ttccatcctcacattcctaagccaccaaaaggagtaataatgcctagaaaggttatctct
gaggatggagtccagcctcaacctttattatggcacgagaagacagctgttgctgaacac
agatattctagaaggtacataccccacaattctgtatcaggacctcgtttggcaaaattg
gctcatcagcttgtatcagaaaactgtttcctgaagcaccaagtgaatggagatggtggc
aatgatagccacagtaagaaacgaaagaagccgcgtagtgctgatagaaagaagcgtacc
ggtgctgaaagaaagaagcggaagaagcaaagacaagagacagtagtgtgctag

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