Nicotiana attenuata (coyote tobacco): 109236817
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Entry
109236817 CDS
T05870
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
nau04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109236817
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109236817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nau03000
]
109236817
Transcription factors [BR:
nau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109236817
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109236817
NCBI-ProteinID:
XP_019258592
UniProt:
A0A314LFF6
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MPLSEFLKMARGKLESGQQKISSTTHLSSFPENDLVELVWENGQIMMQGQSSSAKKSPMP
NKLPSNASKIGKFGVMDSMLNDMPLSVPADELDLIQEDEGVPWLGYAADDSLQQDYCSQF
LPEISGVTANEPSGQSEFGLINKRGSSDKMIRDSHSVPIHNAGNFELRKVSPSSKFSQLC
SLAPQKGHLESGVSDVFSSKISYTPVSVYGDSGQNQAAAGEVKSIKIQKQRMPGSCSSLL
NFSHFSRPATFVKATKLQNITGGLVSDSSTLEAKGSKEGENVTNSHNHVNAAAVEDYLSS
KKENDLHYPTNVVPSQLESRASGASFHDRSCRVEQSDNVFRDNSSNSDNTPGQFTGAKAK
PDTADGERNAEHGVVCSSVCSGSSAERGSSDQPHNLKRKSRDNEDSGCPSEDVEEESVDI
KKTCPTRGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIE
YLKTLQLQVQIMSMGAGFCVPPMMFPAGVQHMHAAQMPHFSPMGFGMGMGMGMGYGMGML
EMNGRSSGCPIFPIPSVQGSHFPSPPISASAAYPGIAVSNRHAFAHPGQGLPMPIPRPSL
APLAGQASTGAAAPLNAARVGVSVDRPSVPPILDSKNPVHKNSQIVNNAESSLPINQTCS
QVQATNEVLDKSALVQKNCQLLDVTDSEANNLTSQSDVPGSEAGEFVLEKTL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgagtttttgaaaatggctagagggaagcttgaatctggccaacagaaa
atctcatctacaactcatctctcttcttttcctgagaatgacttggttgagcttgtatgg
gaaaatggtcagattatgatgcaaggccagtccagtagtgctaagaagagccctatgcct
aataaactaccatcaaatgcctcaaagattgggaagtttggtgtgatggactctatgttg
aatgatatgccattatctgtgcccgctgatgaactggatttgattcaagaggatgaaggg
gtgccttggttaggttatgcagcagatgatagtcttcaacaagattattgttctcagttt
ttgcctgaaatatctggtgtgacggcaaacgaaccatccggacagagtgaatttggttta
ataaataagagaggtagttccgataagatgattagggattcacatagtgttcctattcat
aatgctggtaattttgagctaagaaaggtttctccttcttccaaatttagccagttatgt
tcattggcacctcagaaaggtcatctagaatcaggagtttcagatgtctttagcagtaaa
attagctatactccagtgtcagtgtatggggattcaggtcaaaatcaagctgcagctggt
gaggtcaaaagcattaaaatccaaaagcaacgtatgcctggaagttgctccagcttgctg
aacttctcgcatttctcaagacctgctacatttgttaaagcaactaagcttcaaaatatt
actgggggcttagtctcagattcatctaccttagaagcaaagggaagtaaagaaggagaa
aatgtgacaaatagccacaatcatgttaatgctgcagcagtcgaagactatttaagttcc
aagaaggaaaatgacctccattatccaactaatgtggtaccttctcaactcgagtcaaga
gcgtctggggctagctttcacgatagatcatgtcgcgttgaacagtctgataatgtattc
agagataattcgagtaatagtgacaacacccctggtcagtttactggtgcaaaggcaaag
ccagatacagctgatggtgagagaaatgctgaacatggggttgtttgttcatctgtatgc
tctggtagcagtgcagagagaggatcaagtgatcagcctcataatctaaagaggaaatcc
cgagataatgaggattccgggtgtccaagtgaagatgttgaagaagaatctgttgatatc
aaaaaaacttgccctactcgaggaggtacaggttcaaagagaagccgagctgcagaggtg
cataatttatctgagcggaggcgaagggataggattaacgaaaagatgcgtgcattacag
gaactaatacccaactgcaacaaggcggataaagcttcaatgcttgatgaagctattgaa
tatttgaagacacttcaactgcaagtacagataatgtctatgggagcagggttttgtgtc
ccgccaatgatgtttcctgctggagtgcagcacatgcatgctgctcaaatgccacatttc
tctccaatgggttttgggatgggtatgggaatggggatgggctatggaatgggtatgctt
gagatgaatggtagatcctctggctgccctatttttccaatcccctctgttcaaggatcg
cattttccgtcacctccaatttctgcctctgctgcttatccaggaatcgctgtatccaat
cgtcatgccttcgcacatcctggtcaaggacttcccatgccaatcccacgaccatctttg
gctcctttggcagggcaagcatcaactggtgctgctgcccctttgaacgctgcaagggta
ggagtttcagtggacagaccgagtgtaccaccgattttagattccaagaatccagtacac
aagaactcacagatagtcaataatgctgaatctagcctcccaataaatcagacatgcagt
caggtgcaagcaacaaatgaagttctggacaaatcagctttggtgcaaaaaaattgtcaa
ctccttgatgttactgatagtgaagctaataacttgaccagccaatcagatgtgcccgga
agtgaagctggtgagtttgtattagaaaagactctgtga
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