'Nostoc azollae' 0708: Aazo_3950
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Entry
Aazo_3950 CDS
T01260
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
naz
'Nostoc azollae' 0708
Pathway
naz03030
DNA replication
naz03410
Base excision repair
naz03420
Nucleotide excision repair
naz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aazo_3950
03410 Base excision repair
Aazo_3950
03420 Nucleotide excision repair
Aazo_3950
03430 Mismatch repair
Aazo_3950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naz03032
]
Aazo_3950
03400 DNA repair and recombination proteins [BR:
naz03400
]
Aazo_3950
Enzymes [BR:
naz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Aazo_3950
DNA replication proteins [BR:
naz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Aazo_3950
DNA repair and recombination proteins [BR:
naz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Aazo_3950
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aazo_3950
MMR (mismatch excision repair)
DNA ligase
Aazo_3950
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Aazo_3950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
BRCT_2
Auto_anti-p27
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ADI65444
UniProt:
D7E4X8
LinkDB
All DBs
Position
4010734..4012788
Genome browser
AA seq
684 aa
AA seq
DB search
MMQMTSEAQLVRELRLLLQQASYAYYVLDAPVMEDMVYDRLYRELQELETQYPYLVTPDS
PTQRVGERPATHFTSVRHNIPLYSLENAFNVEELQGWDQRWRRHLMAQYYPVEVDYVAEL
KIDGAALALTYQNGILVRGATRGDGVMGEDITQNVRTIRSIPLRLNFDGLENIEKVEVRG
EVFLPLEVFKQINEKRQKAGEQLFANPRNAVAGTLRQLDSRIVAQRQLDFFAYTVHIPGM
DDASIANTQWEALELLQRLGFRVDTNHRLCHSIREVAEYYEYWDTERLNSPYMTDGVVVK
LNTFKLQEQLGFTQKFPRWAIALKYAAEQAPTRVNNITINVGRTGALTPLAEMRPVQLAG
TTVSRATLHNSDRIQQLDIRIGDTVIVRKAGDIIPEVVRVIKELRPSDTAPFIMPSHCPI
CGQPVVRESGEAVTRCVSASCAAILKGEIEHWVSRDALDIKGMGEKLVHQLVDKELVLSV
SDLYKLIKEELCALERMGQKSAQKLVNAIAQSKNQPWSRVLYGLGIRHVGSVNAQLLTEK
FTTVEQLAAAKQSDIEGVYGIGAEIAQSVYQWFRTPANQTLISRLQDIGLQLANTAETKP
VGEINPNLAGKIFVVTGTLPTLKRDEAKVLIQKAGGKVTDSVSRKTDFLVVGADAGFKVK
KAQSLGITQLTETQLLKMLEVSEN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaatgacttctgaagcccagcttgtacgagaattgcggctgttattacaacaa
gccagttatgcttactatgttcttgatgcaccagttatggaagatatggtttatgataga
ctgtatcgagaattacaagaactagaaacgcaatacccatacttagtcactcctgatagt
ccaactcagcgcgtgggtgaacgacctgcaacccatttcacctcagtacggcataacata
cctctgtatagtttggaaaatgcttttaatgttgaggaattacaaggttgggatcaacgt
tggcgaagacacttaatggctcagtattatccagtagaagttgactatgttgcagaattg
aaaattgatggtgctgctttggcgctaacttaccaaaatggtattctggtgaggggtgcg
accaggggtgatggggtgatgggtgaagatattacccaaaatgtgcggactattcgctca
attccactacgtttgaattttgacggtttggaaaatatcgaaaaggtggaagtacgggga
gaagtatttttacctttggaggtgtttaaacaaattaatgagaaaagacaaaaagcaggt
gagcagttatttgctaacccgcgtaatgctgtggctggtacacttaggcagttagattcc
cgcattgtcgcgcagcgtcagttggatttttttgcttatactgtgcatattccggggatg
gatgatgcgagtattgcgaatactcaatgggaagctttggagttgttacaaaggctcggt
tttcgtgttgatactaaccataggctgtgccattcgattagggaagttgctgaatattac
gaatattgggatactgaacggctgaattctccctatatgactgatggggtggtagtaaaa
ttgaacacttttaagctgcaagaacaactagggtttacacagaagttccctcgttgggca
atcgctcttaaatacgcagcagagcaagcacctacccgtgtaaacaatattactattaat
gtgggtagaacgggggctttaactcctttggcagaaatgcgtcccgtacaattagcaggt
actactgtgtctagagctaccttacataatagcgatcggattcagcaattagatatccgc
attggtgatacagtcattgtccgcaaagctggggacatcatcccagaagtcgtacgggta
attaaagaactccgtccgtctgacactgcaccattcattatgcctagtcattgtcccata
tgtggtcaaccggtggtgagagaatcaggggaagcggtgacaagatgtgtaagtgcttcc
tgtgcggctattctcaaaggagagatcgaacattgggtaagtcgggatgccttggatatt
aaaggtatgggtgaaaaactggtacatcaactggtagataaagagttagtgctttctgtg
tccgatttatacaaattgataaaagaagagttatgtgcattagaacggatgggtcaaaaa
tctgcacaaaaattagtgaatgcgatcgcccaatcaaaaaatcaaccttggtctagagta
ttatacggtttagggattcgtcatgttggcagcgttaacgctcaactattgactgagaaa
tttaccacagtggaacagttagcagctgcaaaacaatcagatattgaaggtgtttacggt
ataggtgcagaaattgctcaatcagtttatcagtggtttcgtacccctgccaatcaaact
ttaatttctcgtctccaagacatcggattacaattagccaacaccgcagaaacaaagcca
gtaggtgaaattaatcctaacttggctggtaaaattttcgtagtcacaggtacattaccc
accttaaaacgtgacgaagcaaaagtactaattcaaaaagctggcgggaaagtaactgat
tccgtaagcaggaaaactgattttttagttgtaggtgcagacgcaggttttaaggtaaaa
aaagcgcaatctttgggaattactcagttaactgaaacacaattattaaagatgttggag
gtttcagaaaactag
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