Nocardioides baekrokdamisoli: Back2_12580
Help
Entry
Back2_12580 CDS
T06654
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nbe03009
]
Back2_12580 (rlmC)
Enzymes [BR:
nbe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Back2_12580 (rlmC)
Ribosome biogenesis [BR:
nbe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Back2_12580 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_12
Methyltransf_11
TPMT
Methyltransf_15
Cons_hypoth95
Methyltransf_ANTKMT
NodS
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BBH16971
UniProt:
A0A3G9ITL4
LinkDB
All DBs
Position
1287805..1288893
Genome browser
AA seq
362 aa
AA seq
DB search
MKCEYFDAGVCRSCALLETPYAVQLQEKQARVASLLPHVPWEAAVASAESGFRNKAKMVV
GGVRGDVTLGILGSDGYGVDLTACGLHTPGIQAALPSLVGFLNEAGFTPYRVPDRDGELK
HLIITEAPSGDLMVRFVLRSPAEIPLIDRTLASVVSVNLQPDHKAILEGPIETVLSVAET
LLMDVNGVGLHLRPQSFFQTNTEVAAALYRTAQAWIADLDIASVWDLYCGVGGFGLHLAA
PGRAVIGVEVSEQAIESARQTAAELRLAATTWRTGDATAYALAAPFEPDLVVVNPPRRGI
GADLASWLERSTVKYVLYSSCNAESLARDLALMPSLRPIRARLLDMFPHTTHHEVAMLLQ
RG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgagtacttcgacgccggcgtctgtcgctcctgcgcgctgctggagacgccc
tatgccgtgcagttgcaggagaagcaggcgcgggtcgcttcgctgctgccgcacgtgccc
tgggaggccgctgtcgcgtcagccgagtcgggattccgcaacaaggccaagatggtggtc
ggcggcgtacgcggcgacgtgacactggggatcctcggctccgacgggtacggggtggat
ctgacggcctgcgggctgcacaccccagggatccaggcggcgctcccctcgctggtgggg
tttctgaatgaggcagggttcacgccgtaccgggtgcccgaccgcgacggcgaactcaag
cacctgatcatcaccgaggcaccgtccggcgacctgatggtgcgcttcgtgctgcggtcc
cccgccgagatcccgctcatcgatcgcacgttggcctcggtggtgtcggtcaatctccag
cccgaccacaaggcgatcctcgagggcccgatcgagacggtcctgtctgttgccgagacc
ttgctgatggacgtcaacggggtcggcctgcacctgcgtccgcagagcttcttccagacg
aacaccgaggtggcggcggcgctctatcgcacggcgcaggcatggatcgccgacctcgac
atcgcctcggtctgggacctctactgcggcgtcggcggcttcgggctccacctcgcggca
ccgggccgggcggtgatcggtgtcgaggtgtccgagcaggccatcgagtcggctcgacag
acagcggctgagctcaggttggctgcgacgacgtggcggaccggcgacgcgacggcgtac
gccctggcagcgccgttcgagcccgatctggtcgtggtcaatccaccccgacgcggcatc
ggcgcggatctggcgtcctggctggagcgctccacggtgaagtacgtcctgtacagctcg
tgcaatgccgagtcgctggcacgagatctggccttgatgccatcgctcagaccgatccgc
gcaaggttgctcgacatgttcccgcacaccacgcatcacgaggtcgcgatgttgttgcag
cgcggttag
DBGET
integrated database retrieval system
