Natronorubrum bangense: DV706_07525
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Entry
DV706_07525 CDS
T05942
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nbg
Natronorubrum bangense
Pathway
nbg03030
DNA replication
nbg03410
Base excision repair
nbg03420
Nucleotide excision repair
nbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DV706_07525
03410 Base excision repair
DV706_07525
03420 Nucleotide excision repair
DV706_07525
03430 Mismatch repair
DV706_07525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbg03032
]
DV706_07525
03400 DNA repair and recombination proteins [BR:
nbg03400
]
DV706_07525
Enzymes [BR:
nbg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DV706_07525
DNA replication proteins [BR:
nbg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DV706_07525
DNA repair and recombination proteins [BR:
nbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DV706_07525
NER (nucleotide excision repair)
GGR (global genome repair) factors
DV706_07525
MMR (mismatch excision repair)
DNA ligase
DV706_07525
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DV706_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
Nlig-Ia
DNA_ligase_ZBD
5_3_exonuc
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QCC54351
UniProt:
A0A4D6HLA8
LinkDB
All DBs
Position
1510499..1512583
Genome browser
AA seq
694 aa
AA seq
DB search
MPAGDATVDEDNPYLRNPPTEFEPLEELSEEAAREQVEHLRAAIREHDRRYYVENDPIIA
DRTYDALFTRLQDLEDAFDLSHPDSPTRSVGGEPLESFDTVEHVAPMLSIDASGGADDVR
EFDDRVRREVGAVDYVCEPKFDGVSMAFIYEDGRLERAVTRGDGREGDDVTANARTIGSV
PQRLHGDRPDFLAVRGEVYMPKDAFQAHNRERIERGEEPFANPRNATAGTIRQLDPSIVA
DRPLEVFFFDVLEASELEASHREELERFPEFGLRVNDRVEVVDSIEGAIDYRDRMLEVRD
DLNYEIDGTVIKVDDREAREELGRTARHDRYAYAYKFPARAEITPIADVAVQIGRTGRVT
PVALLEPVDVGGVTVSRASLHNPEEIAEKNVNVGDTVRVQRAGDVIPYVEEVVEKDSEGH
YELPKHCPVCDSAIERDGPMAFCTGGLACDAQLRRSIEYYASDDGLDLEGLGEKSVRQLV
DASLLESVADLYKLERDELTELEGWGETSAENLLSEIEASREPPLADFLSALGIPHVGPT
TARELAREFGSFEAVREAAKTDPERLEGVDDVGETVAGQIHDFFASEANAAAVDDLLEHV
SPQESDPEHGGDALEGLTVVFTGSLEGITRGEAQDIVEAHGANATGSVSGNTDYLVVGEN
PGQTKRDDAAANDVPIIDEDEFRELLEEQGIDLE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctggcgacgcgaccgtagacgaagacaacccgtatctccggaacccgccgacc
gagttcgagccactcgaggaactctctgaggaagcggcccgtgaacaggtcgaacacctc
cgcgcggccatccgcgaacacgaccgccgatactacgtcgagaacgatccgataatcgcc
gatcgaacctacgacgcgctctttacgcggctgcaggacctcgaggacgcctttgacctc
tcccatccagatagccctaccagaagcgtcggcggcgagccgctcgagtcgttcgacacg
gtcgaacacgtcgcgccgatgctctcgatcgacgcgagcggcggggccgatgacgtccgg
gagtttgacgaccgcgttcgccgcgaggtcggggcggtcgactacgtttgcgagcccaag
ttcgacggcgtctcgatggcgttcatttacgaagacggtcgcctcgagcgtgccgtcacc
cgcggcgacggtcgcgagggcgacgacgtaacggccaacgcccgcaccatcggctcggta
ccccagcgactccacggcgaccgtcccgacttcctcgccgtccggggcgaggtctacatg
ccgaaagacgcctttcaggcccacaaccgcgagcgcatcgaacgcggcgaggagccgttt
gcgaacccccgaaacgcgactgctgggacgatccgccaactcgatccgagtatcgtcgcc
gaccgcccgctcgaggtcttcttcttcgacgtgctcgaggcgagcgagctcgaagcgagc
catcgcgaggaactcgagcgctttcccgagttcggcctgcgagtgaacgaccgcgtcgaa
gtggtcgactcgatcgagggcgcaatcgactaccgtgatcgcatgctcgaggtccgtgac
gacctgaactacgagatcgacggcaccgtgatcaaggtcgacgaccgcgaggcccgcgag
gagctgggtcggaccgctcgccacgaccgttacgcgtacgcgtacaagtttcctgctcga
gcagagatcacaccgatcgccgacgtggcggtccagatcgggcggacggggcgagtgacg
cccgtcgccttgctcgagccggtcgacgtcggcggtgtgacggtctcgcgggccagcctc
cacaatcccgaggagatcgccgaaaagaacgtcaacgtcggcgacacggttcgtgtccag
cgggccggcgatgtcatcccctacgtcgaggaggtcgtcgagaaagacagcgagggccac
tacgaactccccaagcactgtcccgtctgtgacagcgccatcgaacgcgacggaccgatg
gcgttctgtacgggtgggctggcgtgtgacgcccagcttcggcgctcgatcgagtactac
gcgagcgacgacggcctcgacctcgagggactcggcgagaagagcgtccgccagctcgtg
gatgcgagcttgctcgagtccgtcgcggacctatacaaactcgagcgcgacgagctcacg
gaactcgagggctggggtgagaccagcgccgagaacctcttatcggagattgaggccagc
cgcgagcccccactcgccgacttcctctccgcgctggggatccctcacgtcggcccgacg
acggcccgcgaactcgcccgtgagttcggctctttcgaggcggttcgcgaggccgccaaa
accgaccccgaacgactcgagggcgtcgacgacgtcggcgagaccgtcgcggggcagatc
cacgacttcttcgcgagcgaggccaacgctgcggccgtcgacgacctgctcgagcacgtc
tccccgcaggaatccgaccccgagcatggcggcgacgccctcgagggactcaccgtcgtc
tttacgggctcgctcgagggcatcactcgaggcgaggcccaggacatcgtcgaagcccac
ggggcgaacgcaacgggcagcgtctcgggaaacaccgattatctcgtcgtcggcgagaac
cctggccagacgaaacgcgacgacgcggcggcgaacgacgtgccgatcatcgacgaggac
gaatttcgcgagttgctcgaggagcagggcatcgacctcgagtaa
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