KEGG   Natronorubrum bangense: DV706_07525
Entry
DV706_07525       CDS       T05942                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
nbg  Natronorubrum bangense
Pathway
nbg03030  DNA replication
nbg03410  Base excision repair
nbg03420  Nucleotide excision repair
nbg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV706_07525
   03410 Base excision repair
    DV706_07525
   03420 Nucleotide excision repair
    DV706_07525
   03430 Mismatch repair
    DV706_07525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nbg03032]
    DV706_07525
   03400 DNA repair and recombination proteins [BR:nbg03400]
    DV706_07525
Enzymes [BR:nbg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DV706_07525
DNA replication proteins [BR:nbg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DV706_07525
DNA repair and recombination proteins [BR:nbg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DV706_07525
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DV706_07525
   MMR (mismatch excision repair)
    DNA ligase
     DV706_07525
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DV706_07525
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT HHH Nlig-Ia DNA_ligase_ZBD 5_3_exonuc RNA_ligase
Other DBs
NCBI-ProteinID: QCC54351
UniProt: A0A4D6HLA8
LinkDB
Position
1510499..1512583
AA seq 694 aa
MPAGDATVDEDNPYLRNPPTEFEPLEELSEEAAREQVEHLRAAIREHDRRYYVENDPIIA
DRTYDALFTRLQDLEDAFDLSHPDSPTRSVGGEPLESFDTVEHVAPMLSIDASGGADDVR
EFDDRVRREVGAVDYVCEPKFDGVSMAFIYEDGRLERAVTRGDGREGDDVTANARTIGSV
PQRLHGDRPDFLAVRGEVYMPKDAFQAHNRERIERGEEPFANPRNATAGTIRQLDPSIVA
DRPLEVFFFDVLEASELEASHREELERFPEFGLRVNDRVEVVDSIEGAIDYRDRMLEVRD
DLNYEIDGTVIKVDDREAREELGRTARHDRYAYAYKFPARAEITPIADVAVQIGRTGRVT
PVALLEPVDVGGVTVSRASLHNPEEIAEKNVNVGDTVRVQRAGDVIPYVEEVVEKDSEGH
YELPKHCPVCDSAIERDGPMAFCTGGLACDAQLRRSIEYYASDDGLDLEGLGEKSVRQLV
DASLLESVADLYKLERDELTELEGWGETSAENLLSEIEASREPPLADFLSALGIPHVGPT
TARELAREFGSFEAVREAAKTDPERLEGVDDVGETVAGQIHDFFASEANAAAVDDLLEHV
SPQESDPEHGGDALEGLTVVFTGSLEGITRGEAQDIVEAHGANATGSVSGNTDYLVVGEN
PGQTKRDDAAANDVPIIDEDEFRELLEEQGIDLE
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgcccgctggcgacgcgaccgtagacgaagacaacccgtatctccggaacccgccgacc
gagttcgagccactcgaggaactctctgaggaagcggcccgtgaacaggtcgaacacctc
cgcgcggccatccgcgaacacgaccgccgatactacgtcgagaacgatccgataatcgcc
gatcgaacctacgacgcgctctttacgcggctgcaggacctcgaggacgcctttgacctc
tcccatccagatagccctaccagaagcgtcggcggcgagccgctcgagtcgttcgacacg
gtcgaacacgtcgcgccgatgctctcgatcgacgcgagcggcggggccgatgacgtccgg
gagtttgacgaccgcgttcgccgcgaggtcggggcggtcgactacgtttgcgagcccaag
ttcgacggcgtctcgatggcgttcatttacgaagacggtcgcctcgagcgtgccgtcacc
cgcggcgacggtcgcgagggcgacgacgtaacggccaacgcccgcaccatcggctcggta
ccccagcgactccacggcgaccgtcccgacttcctcgccgtccggggcgaggtctacatg
ccgaaagacgcctttcaggcccacaaccgcgagcgcatcgaacgcggcgaggagccgttt
gcgaacccccgaaacgcgactgctgggacgatccgccaactcgatccgagtatcgtcgcc
gaccgcccgctcgaggtcttcttcttcgacgtgctcgaggcgagcgagctcgaagcgagc
catcgcgaggaactcgagcgctttcccgagttcggcctgcgagtgaacgaccgcgtcgaa
gtggtcgactcgatcgagggcgcaatcgactaccgtgatcgcatgctcgaggtccgtgac
gacctgaactacgagatcgacggcaccgtgatcaaggtcgacgaccgcgaggcccgcgag
gagctgggtcggaccgctcgccacgaccgttacgcgtacgcgtacaagtttcctgctcga
gcagagatcacaccgatcgccgacgtggcggtccagatcgggcggacggggcgagtgacg
cccgtcgccttgctcgagccggtcgacgtcggcggtgtgacggtctcgcgggccagcctc
cacaatcccgaggagatcgccgaaaagaacgtcaacgtcggcgacacggttcgtgtccag
cgggccggcgatgtcatcccctacgtcgaggaggtcgtcgagaaagacagcgagggccac
tacgaactccccaagcactgtcccgtctgtgacagcgccatcgaacgcgacggaccgatg
gcgttctgtacgggtgggctggcgtgtgacgcccagcttcggcgctcgatcgagtactac
gcgagcgacgacggcctcgacctcgagggactcggcgagaagagcgtccgccagctcgtg
gatgcgagcttgctcgagtccgtcgcggacctatacaaactcgagcgcgacgagctcacg
gaactcgagggctggggtgagaccagcgccgagaacctcttatcggagattgaggccagc
cgcgagcccccactcgccgacttcctctccgcgctggggatccctcacgtcggcccgacg
acggcccgcgaactcgcccgtgagttcggctctttcgaggcggttcgcgaggccgccaaa
accgaccccgaacgactcgagggcgtcgacgacgtcggcgagaccgtcgcggggcagatc
cacgacttcttcgcgagcgaggccaacgctgcggccgtcgacgacctgctcgagcacgtc
tccccgcaggaatccgaccccgagcatggcggcgacgccctcgagggactcaccgtcgtc
tttacgggctcgctcgagggcatcactcgaggcgaggcccaggacatcgtcgaagcccac
ggggcgaacgcaacgggcagcgtctcgggaaacaccgattatctcgtcgtcggcgagaac
cctggccagacgaaacgcgacgacgcggcggcgaacgacgtgccgatcatcgacgaggac
gaatttcgcgagttgctcgaggagcagggcatcgacctcgagtaa

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