Neisseria brasiliensis: GJV52_01495
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Entry
GJV52_01495 CDS
T06557
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nbl
Neisseria brasiliensis
Pathway
nbl03030
DNA replication
nbl03410
Base excision repair
nbl03420
Nucleotide excision repair
nbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJV52_01495 (ligA)
03410 Base excision repair
GJV52_01495 (ligA)
03420 Nucleotide excision repair
GJV52_01495 (ligA)
03430 Mismatch repair
GJV52_01495 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbl03032
]
GJV52_01495 (ligA)
03400 DNA repair and recombination proteins [BR:
nbl03400
]
GJV52_01495 (ligA)
Enzymes [BR:
nbl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GJV52_01495 (ligA)
DNA replication proteins [BR:
nbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GJV52_01495 (ligA)
DNA repair and recombination proteins [BR:
nbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GJV52_01495 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJV52_01495 (ligA)
MMR (mismatch excision repair)
DNA ligase
GJV52_01495 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GJV52_01495 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
BRCT_2
5_3_exonuc
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QGL24328
LinkDB
All DBs
Position
267250..269718
Genome browser
AA seq
822 aa
AA seq
DB search
MNATEQKIQDLTALLNRYAYEYYTLDAPTVPDAEYDRLFRELEALEAAHPDLKQPDSPTQ
RVGGAALDGFTSVRHTVPMLSLNNAFSPQNEEGVFDHKEMYAFDERVRGGLNGAAVEYVI
EPKFDGLAISLLYRDGVLMQAATRGDGATGEDVTQNVKTIANIPLRLHGDNVPQLIEVRG
EVLMLKADFAALNQRQAEQNQKAFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQQEG
GFVSEEHIQELAYLIELGFSLPYGQFGCFPNIGEVLAFYEQMQQKRPSLPYEIDGMVVKV
NSLAQQDTLGFISRAPRWAIAHKFPAEEALTVVEAIDVQVGRTGAVTPVARLQPVFVGGV
TVTNATLHNEGETQRKDVRVGDTVIVRRAGDVIPEVVRVVFDRRPMQTIETQNHLSDGLQ
DDLFAMPSENTQTDTQPLYPQYRLPEHCPICGSDIEREEGEAVARCSGGMLCQAQRVQGL
IHFASRKAMDIDGLGQRQIEQLVAQDLVQHFADLYRLDITTLQKMKETTEQTEAQLNAED
MPSETILPLSDGLKSSKKASPTKWAQNILDGLEASKQPDLARFLFALGIRHVGERTAKSL
AQAFGDLESVRRAPEPVLACLPDIGSVVAHSIAHFFAQPEQQNMIDELLAVGVAPQTQAI
TLPLAQYVTPERWLNRLPGFKISEKKAAALWDLAGKTVEGLIHDKALPADWQQWRNVDAN
SSLLTTMQQFLIHMPSETDTIAESHSSSLFGKTFVLTGTLPTLKRDEAQAMIEAAGGKVS
GSVSKKTDFVVAGEAAGSKLEKANALGVTVLDEAALLTLLNS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaccgaacaaaaaatccaagacctcaccgccctgctcaaccgctacgcctac
gaatactacacgctcgatgcaccgactgtgcccgatgccgaatacgaccgcctgttccgc
gagctggaggctttagaagccgcgcatcctgatttaaaacagcccgacagcccgacccag
cgtgtcggcggtgcggctttggatggttttaccagcgtgcgccataccgtgccaatgtta
tcgctgaacaatgctttttcaccacaaaacgaagaaggcgtgttcgaccataaggaaatg
tatgcttttgatgaacgcgtgcgcggcggtttaaacggtgcggcggttgaatatgtcatt
gaacccaaattcgacggcttagccatcagtctgctgtatcgcgacggcgtattgatgcaa
gcggctacgcgtggcgatggggcaaccggcgaagatgtgacgcaaaatgtgaaaaccatc
gccaatattcccttgcgtttgcatggcgacaatgtgccgcaactgattgaagtgcgcggt
gaagtgttgatgctcaaagccgattttgccgcgctcaaccaacgccaagccgagcaaaat
caaaaagcgtttgctaatccgcgcaatgccgcggccggcagcctgcgccaactcgattcc
aaaatcaccgcccagcgcaaactgcactttttcgcctacggcatcgcgcaacaagaaggc
ggcttcgtttcggaagaacacattcaagaattggcttatttgatcgaacttggcttcagt
ctaccttacggccaattcggttgtttccccaatattggcgaagtattggctttttacgag
caaatgcagcaaaaacgcccttccctgccgtatgaaattgacggcatggtggtcaaggtc
aacagtttggcacagcaagatacgctgggctttatttcgcgcgcgccacgctgggcgatt
gcgcataaattccctgccgaagaagccttgaccgtggtggaagcgattgacgtgcaagtc
ggccgcaccggtgccgtgacccccgtggcgcgtttgcagccggtgtttgtcggcggcgta
accgtgaccaatgccacgctgcacaatgaaggcgaaacgcagcgtaaagacgtgcgcgtt
ggcgatacggtgattgtgcgccgcgcgggtgacgtgattcccgaagtggtgcgcgtggta
ttcgaccgccggccgatgcaaaccattgaaacacaaaatcatctttcagacggcctgcaa
gatgatttgtttgccatgccatctgaaaacacgcaaacggacacccagccgctttatccg
caataccgcctgcccgagcattgcccgatttgcggcagcgacatcgagcgcgaagaaggc
gaagccgtggcgcgttgcagcggcggtatgctgtgccaagcgcagcgggtacaaggtttg
attcactttgcctcgcgcaaagccatggacatcgacggcctcggtcaacgccaaatcgaa
caattggtggcgcaagatttggtacagcattttgccgacctataccgcttggacatcacc
accctgcaaaaaatgaaggaaaccaccgagcaaacggaagcgcaactcaacgcagaagac
atgccgtctgaaactatcttaccgctttcagacggcctcaaaagcagcaaaaaagcctcg
ccgactaaatgggcgcaaaatattctcgacggcctcgaagcgagcaaacagcctgatttg
gcgcgcttcttgtttgctctcggcatccgtcatgtcggtgaacgcacggccaaatcgctg
gcacaagcattcggcgatttggaaagtgtccgccgcgcacccgaacctgttttggcttgc
ctgccagacatcgggagcgtggtggcgcattccattgcccatttcttcgcccaacccgaa
cagcaaaacatgattgacgaattgctggctgtcggcgttgcaccgcaaacccaagccatc
accctgccgctggcgcaatacgtcacccccgaacgctggctcaaccgcctgcccggcttc
aaaatcagcgagaaaaaagccgccgcgctatgggatttggctggtaaaactgtcgaaggt
ttaatccacgacaaagctttgcccgctgattggcagcaatggcgcaacgttgatgccaat
tcatcgcttttaacgaccatgcagcaatttttgatacacatgccgtctgaaaccgacaca
atagccgaatcccattcaagcagcctgtttggcaaaaccttcgtcttaaccggcaccctg
ccgaccttaaaacgtgacgaagcccaagccatgattgaagccgccggcggtaaagtttcc
ggcagcgtctcgaaaaaaaccgattttgtggtcgcaggtgaagccgccggtagtaaattg
gaaaaagccaatgcgctaggtgtgactgttttggatgaggctgccttgttgacattgtta
aattcgtaa
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