Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_00095
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Entry
HYY55_00095 CDS
T09897
Symbol
pseB
Name
(GenBank) UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
nbn
Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Pathway
nbn00541
Biosynthesis of various nucleotide sugars
nbn01100
Metabolic pathways
nbn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYY55_00095 (pseB)
Enzymes [BR:
nbn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
HYY55_00095 (pseB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_10
NmrA
NAD_binding_4
KR
adh_short
Shikimate_DH
Sacchrp_dh_NADP
F420_oxidored
TrkA_N
NAD_binding_3
S_100
Motif
Other DBs
NCBI-ProteinID:
QQG46237
UniProt:
A0A7T5RLA9
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All DBs
Position
20196..21182
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AA seq
328 aa
AA seq
DB search
MSFECLKDKAILITGGTGSFGRSFVRHLLGSKAKKIVVFSRDELKQSEMQSEMKDERLRF
FIGDIRDLSRLQRAFRDVDVVVHAAALKQVPAMEYNPFEAVQTNIIGSQNVIEAAIDQGV
RKVLLISTDKAAEPINLYGATKLCAEKLFISGNSYAPGKTILSAVRYGNVIGSRGSVIDV
LKRSRDVKRVYITDPAMTRFWITLNQSFKLVDFALENMTGGEIFIPKLSSMKLSDLFDVL
APGAEREIIGPRAGEKIHEVLLTSEESYRALEMEDMYVVLPLFPYEADIHSKYHESGRKP
ESGFRFASHTNKNWLTKEDFKKILNDEL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgaatgcttaaaagataaagctattttaataaccggaggcaccggttctttc
ggccggagttttgtccgtcatttgctgggctctaaagcaaaaaagattgttgttttttca
agggacgagctgaagcaatccgagatgcagagcgaaatgaaagacgagcgtctgcggttt
tttataggcgatattcgcgatttgtcccgccttcaaagggcttttcgggatgttgatgtc
gtggtgcatgccgcggctcttaaacaggtgccggcaatggaatacaatccgtttgaggcg
gtgcaaaccaatataatcggaagccaaaatgttattgaagccgcgattgaccaaggtgtc
cgaaaagttttacttatatcaaccgacaaagccgcggagccgataaatctttacggcgcc
actaagctctgcgcggaaaaattgtttataagcggaaattcttacgctccggggaaaacc
attcttagcgcggtgagatacgggaatgttatcggcagtcgcgggagcgttattgacgtt
cttaaaagaagtcgggatgtcaagcgcgtttacatcacggatccggctatgactcgtttt
tggattaccttaaatcaaagttttaaacttgtggatttcgcgcttgaaaatatgaccgga
ggagaaatttttataccgaaactttcaagcatgaaactttcggacttgtttgatgttttg
gcgccgggagccgagcgggaaataatcggtcctcgcgccggagaaaaaattcatgaagta
ctgcttaccagcgaagagtcctatagggcgttggaaatggaagatatgtatgtggtgctc
cctctgtttccttatgaggcggatattcattccaaatatcatgaatctggacggaaaccc
gagtcgggatttcgcttcgccagccacacgaataaaaattggcttactaaagaggatttt
aaaaaaatacttaacgacgaattatga
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