Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_02160
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Entry
HYY55_02160 CDS
T09897
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nbn
Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Pathway
nbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYY55_02160 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbn03400
]
HYY55_02160 (nth)
Enzymes [BR:
nbn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYY55_02160 (nth)
DNA repair and recombination proteins [BR:
nbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYY55_02160 (nth)
Prokaryotic type
HYY55_02160 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
LPD29
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QQG46625
UniProt:
A0A7T5RM27
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All DBs
Position
complement(404023..404655)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKKKKAAEILRRLKKFYPGAKIRLNYGNHIQLLVAVILSAQCTDKKVNEVTEKLFKKYK
TARDFACANRARFEQEIKSTGFYRAKAKSIMGATKIIDEKYGGKLPKSMAEMVKLPGVGR
KTANIVLGNAYGIVEGIAVDTHVRQFANYCGLSSHYDPVKIEQDLMKLFPKKDWFNLTYM
IIEYNRAMKNKANRQKAGAILKDICPGAPR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagaaaaaggccgcggaaattttgcgtcggcttaaaaaattttaccccggc
gccaaaatccggcttaattatggcaaccatatccagcttttggtcgcggtaatactttcg
gcgcaatgcacggataaaaaagttaacgaggtaacggaaaaacttttcaaaaaatataaa
accgctcgcgatttcgcctgcgccaatcgcgcgcggtttgaacaagaaataaaatcaacc
ggattttatagagccaaagccaagagcataatgggcgctacaaaaattattgatgaaaaa
tacggcggaaaacttccaaagagcatggccgagatggtcaaacttccgggcgttgggcga
aagaccgcaaacattgttttgggcaacgcctacggaattgttgaaggcattgcggttgat
acgcatgtgcgccaattcgccaattactgcggactatcaagccattatgaccccgtaaaa
attgagcaggatttgatgaaattattcccgaaaaaagattggtttaatttgacctatatg
attattgaatacaatagagcaatgaaaaataaagcgaatcgccaaaaagcgggagcgatt
ttgaaagacatttgccctggagcgccccgctag
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