Candidatus Niyogiibacteriota bacterium NC_groundwater_707_Ag_S-0.2um_45_26: HYY55_03885
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Entry
HYY55_03885 CDS
T09897
Name
(GenBank) class I tRNA ligase family protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
nbn
Candidatus Niyogiibacteriota bacterium NC_groundwater_707_Ag_S-0.2um_45_26
Pathway
nbn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nbn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYY55_03885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nbn01007
]
HYY55_03885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbn03016
]
HYY55_03885
Enzymes [BR:
nbn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
HYY55_03885
Amino acid related enzymes [BR:
nbn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HYY55_03885
Transfer RNA biogenesis [BR:
nbn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYY55_03885
Prokaryotic type
Other AARSs
HYY55_03885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
His_Phos_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1_2
DUF7837
Motif
Other DBs
NCBI-ProteinID:
QQG46073
LinkDB
All DBs
Position
683907..687314
Genome browser
AA seq
1135 aa
AA seq
DB search
MTDKDSEHKKSFSESEKEILEYWRKNKIFEETLDKTEKGRPFVFYEGPPYANGRPGIHHA
LARAFKDAILRFKTMRGFYVRRKAGWDTHGLPTEMEVEKKLGLASKKDIEEKVGLEKFVE
EAKKSVFGYKEEWERLTDRMAYWLDLKNPYVTMTNGYIESLWSVFSKIAENGYLYKDYKV
LPWCPRCGTSLSSHELAQGYKKVKDESVYVKFPLKQPKSYLLVWTTTPWTLPGNIALAVN
PKIGYATVEKNGERLILAKSRLEVLEEDYKEINEQKGKDLIGLEYEPLYPISNIKHSTSD
YKIVESDFVTAEDGTGILHVAPAFGREDQEIGKKEKLPTPITVDEEGKLKAPGYAWDGRY
FKDANPLIIEDLKNRQLLFKTELYEHDYPFCWRCQSPLIYFAKNSWFLKTTAVKNQMIAE
NKKIGWHPEFIRDGRFGEWLSENVDWAISRERYWGTPLPIWQCNASGCGHQEIIGSLEEL
DKFGTKRTTRVFIMRHGEADHNVNGYVGPVINGSGLTAKGRKQVEKEVKKLVKEKIDIII
SSPLTRAKQTAEIVSKTLGAKIEVNENIYDYNWGKLQGKTVAEGNKLFPLERRFKESPPG
GESIPDVRARMMMELRKVVKKHGGKNILIISHGDPIWILNAALEGAEEKDYPRLWYPKTG
EAKELKLHNWPYNRAGELDLHRPYIDLIDLVCAKCGGEMKRVKEVADVWFDSGAVPFAQD
NFLFGAKAKRPSQYPADYIAEGVDQTRGWFYTLLAVSSLLKLPAPYKNVLVLGLVLDEKG
EKMSKSRGNAAEPLTLFEKYGADAVRWYFYTVNQPWDEKLFKESDIAEASRRFLNIFWNS
FVYWRTYKDKGSVLKKKPRLLINKWLDIRLNQVGYDATEALEKFDIVRAARMIENFVAED
LSRWYIRRIRDAIRFGSKPEKKEISDIFGLALREVSKLAAPFIPFLTDRMFLEVMKNGSI
HLEKWTKFKKPSVSEKKLVEEMNEARRIVSLGLEARAKAGIKVRQPLALLKIRNPKSEIR
NKKEFLNLIEGEVNIKKIVFDPKIKDEVELDINITPELKEEGQLRELIRHIQEKRKEAGF
KPSDKITFAALTDSKGAAFVKKFEAILKKEAGIKIIIFGEAKQERGPLISLKFNI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaggattcggaacataaaaaatcattttccgaaagtgagaaagaaattttg
gaatactggcggaaaaataaaatttttgaagaaacccttgataaaaccgaaaagggcagg
ccattcgtgttttacgagggacccccttacgccaatggccggccgggtattcatcacgcg
cttgcccgcgccttcaaagacgcgattttgcgttttaagaccatgcggggattttatgtc
cgcaggaaagccggatgggatactcacggattgccgactgaaatggaagtcgagaaaaaa
ctcggtttggcttccaaaaaagatatagaagaaaaagtcggattggaaaaattcgttgag
gaagccaaaaaaagcgtgttcggctacaaagaagaatgggaaagactgaccgaccgaatg
gcttactggcttgatttaaaaaatccgtacgtgactatgaccaatggctatattgagtcg
ctctggtcggttttttccaagatcgcggaaaacggatatttgtataaggactacaaggtt
ttgccgtggtgtccgcgatgcggaacctcgctttcgtcgcatgaactcgcgcagggttat
aaaaaggtaaaagacgaatcagtgtatgttaaatttcccctcaaacaacctaaaagctat
ttattggtttggacgacgactccctggactttgccgggcaacattgctttggcggtcaat
ccgaaaatcggctacgcgacggttgaaaaaaacggcgagcggctgattttggctaaaagc
cggcttgaagttcttgaagaagattataaagaaataaacgaacaaaaaggcaaagatctg
atcggtctggaatatgagccgctttatccaatatctaacattaaacattcaacatccgat
tataagatagtagagtcggatttcgtaactgccgaagacggcaccggcattttgcatgta
gctccggcattcggcagagaggaccaggaaataggcaaaaaagaaaaattgccaactccg
atcacggtggacgaagaggggaaattgaaagcgcccgggtacgcttgggacggcagatat
ttcaaagacgccaatccgcttattattgaagatttaaaaaaccggcagcttctttttaag
accgaactttacgagcacgactatccgttttgctggcgttgtcagtcgcctcttatttat
ttcgcgaagaattcgtggtttttaaaaacaacggcggttaaaaatcaaatgatcgccgaa
aataaaaaaatcggctggcatccggagtttattcgcgacgggcgattcggcgagtggctt
tccgaaaatgttgattgggcgatttcgcgcgagcgttactgggggactcccttgccgata
tggcaatgcaacgcgtccggatgcgggcatcaggaaataatcggatcgcttgaagaactg
gataagttcgggacaaaaagaactacgcgagtttttattatgcgtcacggcgaggcggat
cataatgttaacggctatgtggggccggttataaacggctccggccttaccgcaaaaggc
agaaaacaggttgaaaaagaagtcaaaaaattggtcaaagaaaaaatagacattataatt
tcttccccgttaactcgcgcaaaacaaaccgcagaaattgtgtctaaaacattgggagca
aaaatagaggtaaacgaaaatatttatgattataactggggcaaacttcaaggaaaaacg
gttgcggaagggaacaaattatttccgcttgaaaggagatttaaagaatctccgccgggg
ggagagagcataccggatgttcgagcgagaatgatgatggagttaaggaaagttgtcaaa
aagcacggcggcaaaaatattttaattatcagccacggtgatccgatatggattttgaac
gcggcgcttgaaggggctgaagaaaaagattatccgcgattatggtatccgaaaacaggc
gaagcaaaagaactgaagcttcataattggccgtataaccgagccggagagctggatttg
caccggccttatattgatttgattgatttggtttgtgccaaatgcggaggcgaaatgaag
cgcgtgaaagaagtcgctgatgtgtggtttgattcgggcgccgtgccgtttgcccaggac
aactttttattcggcgcgaaagcgaaaaggcccagtcaataccccgccgactatattgcc
gagggagttgatcaaaccaggggctggttttatacgctgcttgccgtttcgtctctattg
aaattgccggcgccttataaaaacgttctggtcttgggattggttcttgatgaaaaaggc
gaaaaaatgtccaagtcgcgaggtaacgcggctgaaccgctgacgctttttgaaaaatac
ggggcggatgccgtcagatggtatttttacaccgttaatcagccgtgggacgaaaaactt
tttaaagaatcggacatcgcggaggcctcgcgaagattcctgaatattttttggaactcg
tttgtgtattggaggacttataaagacaaggggagtgtcctgaaaaaaaagccgaggctt
cttataaataaatggctggacatcagattaaaccaggttggatacgacgcgactgaagcg
cttgaaaaatttgacattgttcgcgccgcgcggatgattgaaaacttcgtggctgaagat
ttgtcgcgctggtatatcaggcggataagagacgccatcagattcggctcaaagcccgag
aaaaaagagataagcgatatttttggccttgctttgcgcgaggtttcaaaattagcggct
ccttttattccctttttgacagacaggatgtttttagaagttatgaaaaacggcagtatt
catttggaaaaatggactaaattcaaaaaaccgtcagtatccgaaaaaaaactggttgaa
gaaatgaacgaggcgagacggattgtttccttggggcttgaagcgcgggcgaaagccggc
attaaagtccgccagccgctcgcattgcttaaaatccgaaatccgaaatccgaaatccga
aacaaaaaagaatttctaaatttaatagaaggggaggtgaatattaaaaaaatagttttt
gatcccaaaatcaaagacgaagttgagttggacataaacataactcccgaactgaaagaa
gagggccagcttcgcgaacttatacgtcatattcaggagaaaagaaaagaagccggtttt
aagccgtcagataaaataacttttgccgcattaaccgacagcaaaggcgccgcctttgta
aagaagtttgaggcaatccttaaaaaagaagcggggattaaaataataatttttggagaa
gcgaagcaagagcgggggcccctcatttctttaaaatttaatatataa
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