Nocardioidaceae bacterium TYQ2: KLP28_02240
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Entry
KLP28_02240 CDS
T08881
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Pathway
nbt00300
Lysine biosynthesis
nbt00550
Peptidoglycan biosynthesis
nbt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KLP28_02240
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KLP28_02240
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nbt01011
]
KLP28_02240
Enzymes [BR:
nbt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KLP28_02240
Peptidoglycan biosynthesis and degradation proteins [BR:
nbt01011
]
Precursor biosynthesis
Amino acid ligase
KLP28_02240
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QWC86740
LinkDB
All DBs
Position
complement(468989..470536)
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AA seq
515 aa
AA seq
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MRDLAARVARDVLGDAAPAARLTGADASGVAVSGVTLSSQRVRPGDLYAALPGARTHGAT
YAAGAVEAGAVAVLTDEAGLTQLDGAGAPGGVPVLVVPEPRRLLGRLAAELYDHPARRLT
VIAVTGTQGKTTTTRLLDSALAAAGTPAAVIGTVGTRVRGQDLATSLTTPEAPDLHALFA
AMVQTRVEVCAMEVSSHALVLGRTDGLVADVAAFTNLGRDHLDFHDTVEDYFAAKASLFT
PARSRRGVVNSDDEFGRRLLAEASVPCVRFALDDPEAEWRAVDVQLGRAGSTFTVLGPGG
VRVETAVGLPGRFNVANALCAIAVAGEAGLDVARIAEHLGEAGVPGRLEEVPAGRDLGVL
GVVDYAHKPDAVTAAIEALRTVTVGRVITVIGAGGDRDRGKRPVMGRIAASLSDVVVVTD
DNPRSEDPATIRAEVLAGTREAEGAEDRAVEVVEVGDRAEAIAYAVSLAAAGDTVLVAGK
GHETGQLVDGTTHPFDDRDVLARAFRAAATDRGAS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgacctcgcggcgcgggtggcacgcgacgtgctgggcgacgccgcacccgccgca
cgactcaccggcgccgacgcgtcgggcgtcgcggtctccggcgtcacgctgtcctcccag
cgggtccggcccggcgacctgtacgccgctctccccggcgcccgcacgcacggggccacc
tacgccgcgggcgcggtcgaggccggtgcggtcgcggtgctgaccgacgaggccgggctg
acgcagctggacggggccggtgcgcccgggggcgtgccggtgctcgtcgtgcccgagccg
cgccgcctcctcgggcggctggccgcggagctctacgaccaccccgcccgccgcctcacc
gtgatcgcggtgaccggcacgcagggcaagacgaccacgaccaggctgctcgactcggcg
ctggcagccgcgggcacacccgccgccgtcatcggcaccgtcggcacccgcgtgcgcgga
caggacctcgcgaccagcctcaccacccccgaggcgccggacctccacgccctgttcgcc
gcgatggtgcagacccgggtggaggtctgcgcgatggaggtgtcctcccacgccctggtg
ctgggacgcaccgacgggctcgtcgccgacgtcgccgccttcaccaacctcggccgcgac
cacctggacttccacgacaccgtcgaggactacttcgccgccaaggcctcgctcttcacc
cccgcccggagccgccgcggggtggtgaactccgacgacgagttcggacgccgactgctc
gccgaggcgagcgtgccgtgcgtacgcttcgcgctcgacgaccccgaggcggagtggcgg
gcggtcgacgtgcagctcggtcgggccgggtcgaccttcacggtcctcggccccggcggc
gtacgcgtcgagaccgccgtcggcctgcccggccggttcaacgtcgccaacgccctctgc
gcgatcgccgtcgccggcgaggccggcctggacgtcgcgcgcatcgcggagcacctgggc
gaggccggcgtgcccggcaggctcgaggaggtgccggcgggcagggacctcggcgtgctc
ggggtggtcgactacgcccacaagccggacgccgtcacggcggcgatcgaggcgctgcgc
acggtgaccgtcgggcgtgtcatcaccgtcatcggcgccggcggcgaccgggaccgcggc
aagcgccccgtcatgggccgcatcgccgcgtcgctctccgacgtcgtcgtggtcaccgac
gacaacccgcgcagcgaggacccggccacgatccgtgccgaggtgctcgccggcacccgg
gaggccgagggagccgaggaccgggcggtcgaggtggtcgaggtcggggaccgcgccgag
gccatcgcgtacgccgtctccctcgccgccgccggcgacaccgtcctcgtcgcgggcaag
ggccacgagaccggtcagctggtcgacggcaccacccaccccttcgacgaccgtgacgtg
ctggcccgtgccttccgtgccgcggcgaccgaccggggtgcctcgtga
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