Candidatus Nitrosopelagicus brevis: T478_0396
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Entry
T478_0396 CDS
T03537
Name
(GenBank) putative 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00290
Valine, leucine and isoleucine biosynthesis
nbv00660
C5-Branched dibasic acid metabolism
nbv01100
Metabolic pathways
nbv01110
Biosynthesis of secondary metabolites
nbv01210
2-Oxocarboxylic acid metabolism
nbv01230
Biosynthesis of amino acids
Module
nbv_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
T478_0396
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
T478_0396
Enzymes [BR:
nbv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
T478_0396
4.2.1.35 (R)-2-methylmalate dehydratase
T478_0396
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Aconitase_2_N
Motif
Other DBs
NCBI-ProteinID:
AJA92335
UniProt:
A0A0A7V6M4
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All DBs
Position
327878..328360
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AA seq
160 aa
AA seq
DB search
MIGNVIKYEQDNIDTDVIIPGTYLKIHDYNELATHAMEGLDPEFPSKVKDGDFIVAGKNF
GCGSSREHAPIALSTCGIKAVIATSFARIFYRNSVDGAFLLPIEVDDETYKKISNSDQLE
INIEKNEIKNITKNESYSMKPFSEIIAKIIAAGGLFKYKR
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
ttgattggaaatgtaataaaatatgaacaggataatattgacactgatgtcataatccct
ggaacatatctaaaaatccatgattacaatgaattagcaacacacgcaatggaaggatta
gatcctgaatttccatcaaaggttaaggacggagatttcattgttgcaggaaaaaatttc
ggttgtggttcgtcaagagaacatgcacctattgcactctcaacatgtgggataaaagcc
gtaattgctacatcttttgcaaggatattttatagaaactctgttgatggggcatttttg
ttacctattgaagtagatgacgaaacatacaaaaaaatatcaaattctgatcaactagaa
attaacattgaaaaaaatgagataaaaaatatcacaaaaaatgaatcatattctatgaaa
cctttttcagaaataattgcaaaaattattgctgctggtggtcttttcaagtacaaaagg
taa
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