KEGG   Nocardioides sp. JS614: Noca_0340
Entry
Noca_0340         CDS       T00443                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
nca  Nocardioides sp. JS614
Pathway
nca03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Noca_0340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nca03400]
    Noca_0340
Enzymes [BR:nca01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Noca_0340
DNA repair and recombination proteins [BR:nca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Noca_0340
 Prokaryotic type
     Noca_0340
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: ABL79884
UniProt: A1SDJ9
LinkDB
Position
362084..362815
AA seq 243 aa
MPRRTLGPVPAVPESRTGLVRRARKIDRLLAETYPDARCELDFDNPFELLVVTVLSAQTT
DKRVNAVRPTLFAAYPDARTMAGADRATLEGIVGPLGFFRAKTESLLKLSAALVERHGGE
VPPRLDDLVQLPGVGRKTANVVLGNAFGIPGITVDTHFGRLSRRFAWTEETDPVKVEHAV
GALFEKRDWTMLSHHLIWHGRRICHARNPACGACPVARWCPAYGEGPTDPAAAAKLVKTE
GRA
NT seq 732 nt   +upstreamnt  +downstreamnt
gtgcctcgccgtacccttgggcccgtgcccgcagtccccgagtcccgcaccggtctggtc
cggcgcgcccgcaagatcgaccggctgctcgcggagacctaccccgatgccaggtgcgag
ctggacttcgacaaccccttcgagctgctcgtcgtcaccgtgctgtcggcgcagaccacc
gacaagcgggtcaacgcggtgcggcccaccctgttcgcggcctaccccgacgcgaggacg
atggccggcgcggaccgcgcgacgctcgagggcatcgtggggccgttgggcttcttccgt
gccaagaccgagtcgctgctcaagctgagcgccgcgctggtcgagcgccacggcggcgag
gtgccgccccggctcgacgacctggtgcaactgcccggcgtcgggcgcaagaccgcgaac
gtcgtgctcggcaacgccttcggcatccccggcatcaccgtcgacacccacttcggtcgg
ctgtcccgccggttcgcctggacggaggagaccgacccggtcaaggtcgagcacgccgtc
ggcgccctgttcgagaagcgcgactggacgatgctcagccaccacctgatctggcacggt
cggcggatctgccacgcccgcaaccccgcctgtggggcgtgcccggtcgcgcgctggtgc
ccggcgtacggcgaggggccgaccgacccggccgccgcggcgaagctggtgaagaccgag
ggcagggcatga

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