Nocardioides sp. JS614: Noca_3054
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Entry
Noca_3054 CDS
T00443
Name
(GenBank) zinc finger, DksA/TraR C4-type
KO
K06204
RNA polymerase-binding transcription factor
Organism
nca
Nocardioides sp. JS614
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nca03000
]
Noca_3054
03021 Transcription machinery [BR:
nca03021
]
Noca_3054
03009 Ribosome biogenesis [BR:
nca03009
]
Noca_3054
Transcription factors [BR:
nca03000
]
Prokaryotic type
Other transcription factors
Others
Noca_3054
Transcription machinery [BR:
nca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
Noca_3054
Ribosome biogenesis [BR:
nca03009
]
Prokaryotic type
rRNA transcription factors
Noca_3054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-dskA_traR
Plasmodium_HRP
Tsc35
zf_C2H2_13
Zn_ribbon_8
DUF7691
Motif
Other DBs
NCBI-ProteinID:
ABL82556
UniProt:
A1SL71
LinkDB
All DBs
Position
complement(3252670..3253521)
Genome browser
AA seq
283 aa
AA seq
DB search
MARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKK
AAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKK
AAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKEGEAAWTKAELKEVLDELHEQ
REHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERA
LARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaccacgaggaagtcgctcgccggacacgcggcctctgccgcccgcaaggtg
atgccgcgccggccggcgaagaaggctgcgaccgagtcgactccgggagccacgacggcg
aagaagaacggcacggcggcgaaggcggcgcccgccaagaaggcggcgcccgcgaagaag
gccgcgcccgcgaagaaggcggcacccgcgaagaaggccgcgcccgcgaagaaggcggca
cccgcgaagaaggccgcgcccgcgaagaaggcggcacccgcgaagaaggcggcacccgcg
aagaaggcggcacccgcgaagaaggcggcacccgccaagaaggcggcacccgccaagaag
gcggcacccgccaagaaagcggcacccgccaagaaggcgacgcccgccaagaaggcggca
cccgccaagaaggcggcaccggcgaagaaggtgtcgcccagcgcactcgtggtcaaggag
ggcgaggccgcctggaccaaggccgagctcaaggaggtgctcgacgagctgcacgaacag
cgcgagcacagccagcggatcatcgaggcccaggaagccgagctcgacggcctgatgcgc
gactccggtgacggagccggtcaggaccaggcggacctcggggcgaccagcttcgagcgc
gaccacgagctgaccgtcctcaacagcgagcgggacaagctggcccagatcgagcgggcc
ctggcgcgcatcgacgacggcacgtacggcgtgtgcgagtcctgcggcaacccgatcggc
aagatgcggctcatggcgttcccgcgtgccacactgtgcatgacatgcaagcagcgcgag
gaacgtcgctga
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