KEGG   Sciurus carolinensis (gray squirrel): 124958238
Entry
124958238         CDS       T08117                                 
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124958238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124958238
   04121 Ubiquitin system [BR:ncar04121]
    124958238
   03036 Chromosome and associated proteins [BR:ncar03036]
    124958238
Enzymes [BR:ncar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     124958238
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    124958238
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     124958238
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124958238
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124958238
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 124958238
NCBI-ProteinID: XP_047372040
LinkDB
Position
11:complement(8707990..8820591)
AA seq 1162 aa
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEGVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPSADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgagacga
cgctatgaagatgatggcatttcagatgatgaaatcgaagggaaacgaacttttgacttg
gaagagaaactccacaccaacaaatataatgccaattttgttacttttatggagggaaaa
gattttaatgtagagtatatccagcggggtggtttgagagaccctctgattttcaagaat
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcggatggtggatgtcatggatgtgaacacacaaaaaggcattgaa
atgactatggctcagtggacacgctactatgaaaccccagaggaagagcgagaaaaactt
tataatgtcatcagcctagagtttagccacaccaggctggagaacatggtgcagagacct
tctacggtggatttcattgactgggtagacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccattctggagatgcagtaccctaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatactgatttccatgtggactttggtggtacctctgtt
tggtatcatatccaccaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaactggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtacactcctacagacacattagtgtttggaggcaactttttg
catagcttcaacatccccatgcagttaaagatatacaacattgaagatcggacacgggtt
ccaaataagttccgctatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgtataaccaaccgctcccacctaactaaggaatttcagaaagaatccctcagc
atggatttggagttaaatgggttggagtctggaaatggggatgaggaaggagtcgaccga
gaaccccgacgcttgagcagtaggcgttctgtcctcactagccctgtagccaatggtgtc
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatcctctgactctagccggggctcccacaatggccaagtgtgggat
ccccagtgtagtccccgaaaggacaggcaagtgcatttgacccattttgagcttgaaggc
cttcgctgccttgtagataagttggagtctctgccactacacaagaagtgtgtccccaca
gggatagaagacgaagatgcgctcattgccgatgtaaagattttgctggaggagcttgcc
aatagtgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccctactaggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaagccagccccacggttaacacctgtgaggccagcagcagcctcacccatt
gtgtctggagccaggcggagaagagttcgctgtcgaaaatgcaaagcctgtgtgcaagga
gaatgtggtgtttgccactactgcagggacatgaagaagtttgggggtcctggacgaatg
aagcagtcctgtgttctcagacagtgcttggcacccagactgcctcactcagtcacatgt
tccctttgtggagaggtagatcagaatgaggagacacaggactttgagaagaagctcatg
gagtgctgcatctgcaatgagattgttcatcctggatgcctacagatggatggagaggga
ttgcttaatgaggaattgccaaattgctgggagtgtccgaaatgttaccaggaggacagc
tcggagaaagctcagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgatgagccccttacacccccgcctcactcacccact
tccatgctacagctcatccacgaccccgtttccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagtcgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaagccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgaaaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccacaacgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacatgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggcc
attgtaccccaggctctcagtggcatcatcaagaggcaaccagttagcctcgacctcagt
tggaccaacatctccaaaaagcagctgacatggctggtcaataggctgccaggattgaaa
gacctcctcctagcaggctgctcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccatcagccgataagccaggtcaggacaatcgcagcaagctccggaac
atgactgatttccggctggcaggccttgacatcacagatgccacgcttcgcctcatcatt
cgccacatgcccctcttgtctcgactcgaccttagtcactgcagccaccttacagatcag
tcctccaacctactcactgccgtcgggtcttccactcgctattccctcacagagctcaat
atggcaggttgcaataaattgacagaccagacgctgatctacctacggcgcatcgccaat
gtcaccttgatcgaccttcgaggttgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagcctgtactgcctgtctgacgagaagctgatacagaag
atcagctaa

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