Sciurus carolinensis (gray squirrel): 124958394
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Entry
124958394 CDS
T08117
Name
(RefSeq) C-Jun-amino-terminal kinase-interacting protein 1 isoform X1
KO
K04434
mitogen-activated protein kinase 8 interacting protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124958394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124958394
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
124958394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
SH3_9
SH3_1
SH3_2
PID_2
Motif
Other DBs
NCBI-GeneID:
124958394
NCBI-ProteinID:
XP_047372318
LinkDB
All DBs
Position
11:complement(33414432..33432482)
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AA seq
707 aa
AA seq
DB search
MAERESGGLGGGAASPPAASPFLGLHIASPPNFRLTHDISLEEFEDEDLSEITDECGISL
QCKDTLSLRPPRTGLLSAGGGSAGSRLQAEMLQMDLIDAAGDTPGAEDDEEEDDEVRAAR
RLGAGPPQAESGQEPAPRGQGQSQGPGSGDTYRPKRPTTLNLFPQVPRSQDTLNNNSLGK
KHSWQDRVSRSSSPLKTGEQTPPHEHICLSDELPPQGSPAATKDRGTSTDSPCRRSAATQ
MAPPGGPPASAPGGLGHSHRDRIHYQADVRLEATEEIYLTPVQRPPDPAEPASAFLPPAE
SRMSVSSDPDPAAYPSAAGRPHPSISEEDEGFDCLSSPERAEPPGGGWRGSLGEPPPPPR
ASLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASASSPYE
SAIGEEYEEAPRPRPSTCLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCVI
NGEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYA
IEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFN
PPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHP
ADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgagagagcggcggcctgggcgggggggccgcgtccccgcccgccgcctcc
ccgttcctggggctgcacatcgcgtcgcctcccaatttcaggctcacccatgacatcagc
ctggaggagtttgaggatgaagacctatcagagatcactgatgagtgtggcatcagcctg
cagtgcaaagacaccctgtccctacggcccccgcgcaccgggctgctgtctgcgggcggc
ggcagcgcggggagccggctgcaggcagagatgctgcagatggacctgatcgacgcggcg
ggggacactcctggcgcggaggacgacgaggaggaggacgatgaggttcgcgcggcgcgg
cggctgggagcagggccgccccaggccgagtccggccaggagccagcgccccgcggccag
ggccagagccaaggcccgggcagcggggacacgtaccggcccaagcggcccaccacgctc
aacctctttccgcaggtgccgcgatctcaggacacactgaataataattctcttggcaaa
aagcacagttggcaggatcgggtgtctcggtcgtcctcacccctgaagacaggggaacag
acgccgccacatgaacacatctgcctgagcgatgagctgccacctcagggcagccctgcc
gccaccaaggatcgaggcacctccactgacagcccttgtcgccgcagtgctgccacccag
atggcacctccaggtggccctcctgcttccgcacctggtggcctgggccactcccatcga
gaccgaatccactaccaggcggacgtgcggctagaggccaccgaggagatctacctgacg
ccggtgcagcggcctccagaccccgcagagcctgcctccgccttcttgccgcccgccgag
agccgcatgtccgtcagctctgacccagaccccgcggcctacccttccgcggcagggcgg
cctcacccctccattagtgaagaggatgagggctttgactgcctgtcatccccagagcgg
gctgagccaccaggcggaggatggcgggggagcctaggggagcccccgccacctccaagg
gcctcgctgagctccgacaccagcgccctgtcctacgactcggtcaagtacaccctggtg
gtggacgagcatgcgcagctggagctggtgagcctgaggccctgctttggagactacagt
gacgagagcgactcggccaccgtctacgacaactgtgcctccgcctcctcgccctatgag
tcggccattggggaggaatacgaggaggccccgcggccgcggccctccacctgcctctcg
gaggactccacgcccgacgagcctgacgtccacttctccaagaagttcctgaacgtcttc
atgagcggccgctctcgctcctccagtgcagagtcctttggcctgttctcctgtgtcatc
aacggggaggagcaggagcaaacccaccgggccatattcaggtttgtgcctcgacatgaa
gacgaacttgagctagaagtggatgaccctctgctggtggagctgcaggctgaggactat
tggtacgaggcctacaacatgcgcactggtgcccgaggcgtctttcctgcctactacgcc
attgaggtcaccaaggagcccgagcacatggcagccctggccaaaaacagcgactgggtg
gaccagttccgggtgaagttcctgggctcagtgcaggttccctatcacaagggcaatgac
gtcctgtgcgccgctatgcaaaagattgccaccacccgccggctcaccgtgcactttaac
ccgccctccagctgcgtccttgagatcagcgttaggggtgtgaagataggtgtcaaggcc
gatgactcccaggaggccaaggggaataaatgtagccactttttccagctaaagaacatc
tccttctgtggataccatccaaagaacaacaagtactttgggttcatcaccaaacaccct
gccgaccaccggtttgcctgccacgtctttgtgtctgaagactccaccaaagccctggca
gaatccgtggggcgagccttccagcagttctacaagcagtttgtggagtacacctgcccc
acggaggacatctacctggagtag
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