Sciurus carolinensis (gray squirrel): 124959679
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Entry
124959679 CDS
T08117
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00310
Lysine degradation
ncar01100
Metabolic pathways
ncar04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124959679
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124959679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124959679
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
124959679
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124959679
Heterochromatin formation proteins
Other heterochromatin formation proteins
124959679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
Cic
DUF4537
BRCA-2_OB3
Chromo
Motif
Other DBs
NCBI-GeneID:
124959679
NCBI-ProteinID:
XP_047373987
LinkDB
All DBs
Position
1:complement(98576482..98606713)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMECVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDETSRPT
EIIEIPDEDDDVLSIDSGSNPVPHTLLGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDA
VNKKSSSQDLHKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKY
KVKFDNKGKSLLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNK
LRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKS
GQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALE
KKQGGQLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPTAPPAPSVPPASP
LSSQAGDNESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQT
YRSPLGSTTSAPAPPAPPAPPAPPAPPGPPGPPGPPAPPAPPALPAPPAPPAPPAFHGML
ERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARR
RVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKP
FYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGC
RDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPHMCTNR
LVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFA
NLDHIESVENFKEGYESDVPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDED
FSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPPHLPIPSSIPVGGCNPPSSEE
TPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGKAGGNRGEAEKASTSGMVIKDEG
DVKQAKKEDSDDRNKMSVVTESTRNYGYNPSPVKPEGLRRPPSKTSMHQSRRLMASAQSN
PDDILTLSSSTESEGESGTSRKPTPGQTSAAAVDSDDIQTISSGSEGDDFEDKKNMSGPT
KRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYDGEESCYIIDAKLE
GNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGK
ELLCCCGAIECRGRLL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtcagaa
gagattgcagagctgcaacaggcagtggttgaggagcttggtatctctatggaggaactt
cggcagttcattgatgaagaattggaaaagatggaatgtgtacaacagcgcaagaaacaa
ctagcagagttggagacatgggtaatacagaaagaatctgaagtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacagtaccgggacagtagctctgaggatgaaacttcccgtcccaca
gagataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggatcgaac
ccagtgcctcacacattgctaggtgatgctggcagcagaactccaaaagatcagaagctc
cgtgaggctatggctgccttaagaaaatcagcccaggatgtccagaagttcatggatgct
gtcaataagaagagcagttcccaggatttacataaaggaaccttgagtcagatgtctgga
gaactgagcaaagatggtgacctgatagtcagcatgcggattcttggcaagaagagaact
aagacgtggcacaaaggcacccttattgccatacagacagttgggccaggaaagaaatat
aaggtgaaatttgacaacaaaggaaagagtctgctttcagggaaccatattgcctatgat
taccaccctcctgctgacaagctatatgtgggtagtcgagtggtggccaaatacaaagat
gggaatcaggtgtggctgtatgctggcattgtggctgagacaccaaacgtcaaaaataag
ctcaggtttcttattttctttgacgatgggtatgcttcctatgtcacacagtcagaactc
tatcccatttgccggcccttgaaaaagacttgggaggacattgaagacatctcctgccga
gacttcatagaggagtatatcactgcttaccccaaccgacccatggtgctgctcaagagc
ggccagcttatcaagactgagtgggaaggcacgtggtggaaatcccgagttgaggaagtg
gatggcagcctagtcaggatcctcttcctggatgacaaaagatgtgagtggatctatcga
ggctctacacgactggagcccatgttcagcatgaagacatcttcagcctctgcactggag
aaaaagcaagggggacagctcaggacacgtccaaatatgggtgctgtgaggagcaaaggc
cctgttgtccagtacacacaggatctgaccagtactggaacccagttcaaaccagtggag
cccccacagcctacagctcctacagctccacctgccccctctgtcccacctgcttcacct
ctgtcctcccaggcaggtgacaatgaaagcttggaaagccagcttgctcagtcacggaag
caggtagccaaaaagagcacatccttccgaccaggatctgtgggttctggtcattcctct
cctacgtctcctgcactcagtgaaaatgcccctggtgggaaacctgggatcagtcagact
tacagatcgccattaggctcaacaacctctgccccagcacctccagcccctccagcccct
ccagcccctccagcccctccaggtcctccaggtcctccaggtcctccggcccctccagcc
cctccagctcttccagctcctccagcccctccagcccctccagccttccatggtatgctg
gagcgggccccagcagagccttcctaccgtgcccccatggaaaagcttttctacttacct
catgtctgcagctatacttgtctgtctcggatcagacctatgaggaatgagcagtaccgg
gggaagaaccctctgttagtcccactgctgtatgacttccggaggatgacagcccgtcgt
cgagttaatcgcaagatgggttttcatgttatttataagacaccttgtggcctctgcctt
cggacaatgcaggagattgaacgctacctttttgagactggatgtgacttccttttcctg
gagatgttctgtttggatccgtatgttcttgtggaccggaagtttcagccctataagcct
ttttactatattttggacatcacttatggaaaggaagatgttcccctctcttgtgtcaat
gaaattgacacaactcccccaccccaggtggcctatagcaaggaacgtatcccaggcaag
ggtgttttcattaacacaggccctgaatttctggttggctgtgactgtaaggatgggtgt
cgtgacaagtccaagtgtgcctgccatcagctgactatccaggctacagcctgcaccccc
gggggccaaatcaaccctaactctggctaccagtacaagagactagaagagtgtctgccc
acaggggtttatgaatgtaacaaacgctgtaaatgtgatccacacatgtgcacaaaccga
ttggtacagcatggactacaggttcggctacaactattcaagacacagaacaagggctgg
ggtatccgctgcttggatgacattgccaaaggctcttttgtttgtatttatgcaggcaaa
atcctgacagatgactttgctgacaaggaaggtctagaaatgggtgatgagtattttgca
aatttggaccatatagagagtgtggagaacttcaaggaaggatatgagagtgatgtcccc
tgttcctctgacagcagtggtgtagatttgaaggaccaagaagatggcaacagtggtaca
gaggatcctgaagagtccaatgatgatagctcagatgataacttctgtaaggatgaggac
ttcagcaccagctcagtttggcgcagctatgctacccggaggcagacccggggccagaag
gagaatggattgtctgagacagcttccaaggattctcgtcccccagaccttgggccccca
catcttcctatcccttcctcaattcctgtagggggctgtaatccaccttcctccgaagag
acacccaagaacaaagtggcctcatggttgagctgcaatagtgtcagcgaaggtggtttt
gctgactctgatagccgttcatccttcaagactagtgaaggtggggagggcaaggctggg
ggaaatcgaggggaggctgagaaggcctctacttcaggaatggtcatcaaggatgaagga
gatgtcaaacaggctaagaaagaggactctgatgaccgaaacaagatgtcagtagttact
gaaagcactcgaaattatggttacaatccttctcctgtgaagcctgaaggacttcgacgc
ccacctagtaagactagtatgcatcagagccggcgactcatggcctcagcccagtccaac
cctgatgatatcctgacactgtccagcagcacagaaagtgagggggaaagtggaaccagc
agaaagcccactcctggtcagacgtcagccgcagcagttgacagtgatgatatccagacc
atctcctctggctctgaaggggatgactttgaggacaagaagaacatgtctggtccaaca
aagcgccaggtggcagtgaaatcaacccggggctttgctcttaaatcaacccatgggatt
gccattaaatcaaccaacatggcctctgtggacaagggggaaagtgcacctgttcggaag
aacacacgccagttctatgatggtgaagagtcttgctacatcattgatgccaagcttgaa
ggcaacctgggccgctacctcaatcacagttgcagccccaacctgtttgttcagaatgtc
ttcgtggatacccatgatcttcgcttcccttgggtggccttctttgccagcaagagaatc
cgggctggaacagaacttacttgggactacaactatgaggtgggcagtgttgaaggcaag
gagctgctctgctgctgtggagccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
