Sciurus carolinensis (gray squirrel): 124960679
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Entry
124960679 CDS
T08117
Name
(RefSeq) acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase-like
KO
K00739
acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase [EC:
2.4.1.147
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00512
Mucin type O-glycan biosynthesis
ncar01100
Metabolic pathways
Module
ncar_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
124960679
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124960679
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.147 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase
124960679
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
124960679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
DUF8681
Motif
Other DBs
NCBI-GeneID:
124960679
NCBI-ProteinID:
XP_047375526
LinkDB
All DBs
Position
11:79223266..79224411
Genome browser
AA seq
381 aa
AA seq
DB search
MAFPCRRSMNPKTLAFLLVGVSFLALRMWLLQVPRSQQEQKGKGPTDRLHTPRAAAQPPT
LHPGLPCVANASANSTADFQQLPARIQDFLRYRHCRHFPLLWDAPAKCAGSRGVFLLLVV
KSSPANYERREVIRRTWGQERSYRARRVRRLFLLGTPAPEEAAQAPQLAELVGLEAREHG
DVLQWAFTDTFLNLTLKHVHLLDWLVARCPLARFLLSCDDDVFVHTPNLLSFLETQSPDR
HLFVGQLMDGSVPIRDSWSKYFVPPQLFPGKAYPLYCSGGGFLLSRHTARALRTAARHTP
LFPIDDAYMGMCLQRAGLQPSGHEGIRPFGVQLPGAHKLSFDPCMYRELLLVHRFVPYEM
LLMWKALHNPALSCGRVHRVS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttttccctgcagaagatccatgaatcccaagactctggccttccttctggtgggt
gtgagtttcttggcactgcgcatgtggctcctccaagtcccaaggtcccagcaggaacag
aaggggaagggcccgacggaccgtctccacactcccagggctgcggcacagccccctacg
ctccacccggggctcccgtgcgtggccaatgcctcagcgaacagcacagctgacttccag
cagctgccggcgaggatccaagacttcctgcggtaccgccactgccgccacttcccactc
ctctgggacgcgccggccaagtgtgccggcagccgcggggtcttcctgctcctggtggtg
aagtcgtcacctgccaactatgagcggcgcgaggtcatccgtcgcacgtggggacaggag
cgcagctacagagcgcggcgagtgcgccgcctcttcctgctgggcaccccagcgccggag
gaggccgcgcaggcgccgcagctcgcggagcttgtgggcctggaggcgcgcgagcacggc
gacgtgctgcagtgggccttcactgacaccttcctcaacctcacgctcaagcacgtgcac
ctgctcgactggctggtggcgcgctgcccacttgcccgcttcctgctcagctgcgacgac
gacgtctttgtgcacacacccaacctgcttagctttctagagacgcagtcgccggaccgc
cacctcttcgtcgggcagctcatggacgggtcggtgcccatccgcgacagctggagcaag
tactttgtgcccccgcagctcttcccagggaaggcctacccattgtactgcagtggcggc
ggcttcctcctgtcgcgccacacggcccgggccctgcgcaccgccgcacgccacacccct
ctcttcccgatagacgacgcctacatgggcatgtgcctgcagcgcgcaggtctacagcct
agcggacacgagggcatccggccctttggcgtgcagctgccgggcgcccataagctctcc
ttcgacccctgcatgtaccgcgagctgctgctagtgcaccgcttcgtgccctacgagatg
ctgctcatgtggaaggcactgcacaaccccgcgctgagctgtggccgggtacacagggtt
tcctga
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