KEGG   Sciurus carolinensis (gray squirrel): 124962014
Entry
124962014         CDS       T08117                                 
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar01524  Platinum drug resistance
ncar04010  MAPK signaling pathway
ncar04014  Ras signaling pathway
ncar04060  Cytokine-cytokine receptor interaction
ncar04068  FoxO signaling pathway
ncar04151  PI3K-Akt signaling pathway
ncar04210  Apoptosis
ncar04217  Necroptosis
ncar04650  Natural killer cell mediated cytotoxicity
ncar04722  Neurotrophin signaling pathway
ncar04932  Non-alcoholic fatty liver disease
ncar04936  Alcoholic liver disease
ncar04940  Type I diabetes mellitus
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05142  Chagas disease
ncar05143  African trypanosomiasis
ncar05160  Hepatitis C
ncar05161  Hepatitis B
ncar05162  Measles
ncar05163  Human cytomegalovirus infection
ncar05164  Influenza A
ncar05165  Human papillomavirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05200  Pathways in cancer
ncar05205  Proteoglycans in cancer
ncar05320  Autoimmune thyroid disease
ncar05330  Allograft rejection
ncar05332  Graft-versus-host disease
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124962014
   04014 Ras signaling pathway
    124962014
   04068 FoxO signaling pathway
    124962014
   04151 PI3K-Akt signaling pathway
    124962014
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124962014
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124962014
   04217 Necroptosis
    124962014
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    124962014
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    124962014
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124962014
   05205 Proteoglycans in cancer
    124962014
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124962014
   05161 Hepatitis B
    124962014
   05160 Hepatitis C
    124962014
   05164 Influenza A
    124962014
   05162 Measles
    124962014
   05168 Herpes simplex virus 1 infection
    124962014
   05163 Human cytomegalovirus infection
    124962014
   05165 Human papillomavirus infection
    124962014
  09174 Infectious disease: parasitic
   05142 Chagas disease
    124962014
   05143 African trypanosomiasis
    124962014
  09163 Immune disease
   05320 Autoimmune thyroid disease
    124962014
   05330 Allograft rejection
    124962014
   05332 Graft-versus-host disease
    124962014
  09164 Neurodegenerative disease
   05022 Pathways of neurodegeneration - multiple diseases
    124962014
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124962014
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    124962014
   04936 Alcoholic liver disease
    124962014
   04932 Non-alcoholic fatty liver disease
    124962014
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    124962014
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124962014
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124962014
   04090 CD molecules [BR:ncar04090]
    124962014
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   124962014
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  Tumor necrosis fators
   124962014
CD molecules [BR:ncar04090]
 Proteins
  124962014
SSDB
Motif
Pfam: TNF MRVI1 LapA_dom
Other DBs
NCBI-GeneID: 124962014
NCBI-ProteinID: XP_047377052
LinkDB
Position
12:complement(111465262..111472963)
AA seq 277 aa
MQQPLNYPYPQIYWVDSSASSPWAPPESVFACPSSVPRRPGQRRPPPPPPLPPPPLPPLP
PLPPPPLKKSRDHNTGLWLLVIFFMVLVALVGLGLGMYQLFHLQKELAELRESTSQRDTK
SSLEKQIGHPSSPSEKKALRRVAHLTGKPNSRSGPLEWEDTYGIALISGVKYQKGGLVIN
DTGVYFVYSKIYFRGQFCNNQPLSHKVYMKNSKYPQDLVLMEGKMMNYCTTGQMWARSSY
LGAVFNFTSNDHLYVNVSELSLVNFEESKTFFGLYKL
NT seq 834 nt   +upstreamnt  +downstreamnt
atgcagcagcctttgaactacccatatccccagatctactgggtggacagcagtgccagc
tctccctgggcccctccagagtctgtgtttgcctgtccatcctctgtgcccagaagacct
ggtcaacggaggcccccacccccacctccactgccacctccaccattgccaccgctgccc
ccactgccgccaccgcccctaaagaagagcagggaccacaacacaggcttgtggctcctt
gtgatatttttcatggtgctggtggccctagttggactgggcctgggaatgtatcagctc
ttccacctgcagaaggagctggcggaactccgcgagtccaccagtcaaagagataccaaa
tcatctttggagaagcaaataggccaccccagttcaccctctgagaaaaaggcactgagg
agagtggcccatttaacaggtaaacccaactcaaggtccggcccgctggaatgggaagac
acctatggaattgccctgatctctggagtgaagtatcagaagggtggccttgtgatcaat
gacactggagtgtactttgtgtattccaaaatatacttccggggtcaattctgcaacaac
cagccactgagccacaaggtctacatgaagaactctaagtatccccaggacctggtgctg
atggagggtaagatgatgaactactgcactactggccagatgtgggcccgcagcagctac
ctgggggctgtgttcaatttcaccagtaatgaccatttatatgtcaacgtatctgagctc
tccctggtcaattttgaagaatctaagacattttttggcttatataaactctaa

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