Sciurus carolinensis (gray squirrel): 124962040
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Entry
124962040 CDS
T08117
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04330
Notch signaling pathway
ncar04722
Neurotrophin signaling pathway
ncar05010
Alzheimer disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124962040
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124962040
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124962040
05022 Pathways of neurodegeneration - multiple diseases
124962040
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124962040
Peptidases and inhibitors [BR:
ncar01002
]
Aspartic peptidases
Family A22: presenilin family
124962040
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
124962040
NCBI-ProteinID:
XP_047377092
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Position
12:complement(61476248..61506059)
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AA seq
448 aa
AA seq
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MLTFMASDSDEEVCDERTSLMSAESPTPRSCQEGRQGLEDGENTAQRRNHDSEEDCEEDP
DHYDCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEVFEPHLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcacattcatggcctctgacagtgacgaagaagtgtgcgatgagcgaacatccctg
atgtcagctgagagtcctacaccacgctcctgccaggagggcagacaggggttggaggat
ggagagaacactgcccagcggaggaaccatgatagcgaggaggactgtgaagaggaccct
gaccactacgactgcagtggggtccctggacggccaccaggcctggaggaagagctgacc
ctcaaatatggggcaaagcacgtgatcatgctgtttgtgcctgtcacactgtgcatgatt
gtcgtggtggccaccatcaagtccgtgcgcttctacacagagaagaatggacagctcatc
tacactccattcaccgaggacactccctcagtgggccagcgcctcctcaactctgtgctg
aacaccctcatcatgatcagtgtcatcgtggtcatgaccatcttcttggtggtgctctac
aagtaccgctgctacaagttcatccatggctggttgatcatgtcctctctgatgttgctg
ttcctattcacttatatctacctcggagaagtacttaagacctacaatgtggctatggac
tacccgaccctcttcctgactgtctggaactttggggcagtaggcatggtgtgcattcac
tggaagggccccctggtgctgcagcaggcctacctcatcatgatcagcgccctcatggcc
ttggtattcatcaagtacctcccagagtggtctgcatgggtcatcctgggtgccatctct
gtgtatgatcttgtggctgtgctgtgtcccaaagggccactgaggatgctggtggaaact
gcccaagagagaaatgaacccatatttcctgccctgatatactcatctgccatggtgtgg
acagtgggcatggcaaagctggatccctcctctcagggagccctccaactcccatatgac
ccggagatggaagaagactcctatgacagttttggggagccctcataccctgaagtcttt
gaaccccacctgcctggctacccaggggaggagctggaagaagaggaggaaaggggtgtg
aagctcggcctgggagatttcatcttctacagcgtgctggtaggcaaggcggcagccaca
ggcagtggggactggaacaccacgctggcctgctttgttgctattctcatcggtttgtgt
ctcaccctcctgctgctcgctgtgttcaagaaagcgctgcctgccctgcccatctctatc
accttcgggctcatcttctacttctccactgacaacctggtgcgccctttcatggacacc
ttggcctcccaccagctctacatctga
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