KEGG   Sciurus carolinensis (gray squirrel): 124962040
Entry
124962040         CDS       T08117                                 
Name
(RefSeq) presenilin-2 isoform X1
  KO
K04522  presenilin 2 [EC:3.4.23.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04330  Notch signaling pathway
ncar04722  Neurotrophin signaling pathway
ncar05010  Alzheimer disease
ncar05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124962040
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    124962040
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124962040
   05022 Pathways of neurodegeneration - multiple diseases
    124962040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ncar01002]
    124962040
Peptidases and inhibitors [BR:ncar01002]
 Aspartic peptidases
  Family A22: presenilin family
   124962040
SSDB
Motif
Pfam: Presenilin
Other DBs
NCBI-GeneID: 124962040
NCBI-ProteinID: XP_047377092
LinkDB
Position
12:complement(61476248..61506059)
AA seq 448 aa
MLTFMASDSDEEVCDERTSLMSAESPTPRSCQEGRQGLEDGENTAQRRNHDSEEDCEEDP
DHYDCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEVFEPHLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgctcacattcatggcctctgacagtgacgaagaagtgtgcgatgagcgaacatccctg
atgtcagctgagagtcctacaccacgctcctgccaggagggcagacaggggttggaggat
ggagagaacactgcccagcggaggaaccatgatagcgaggaggactgtgaagaggaccct
gaccactacgactgcagtggggtccctggacggccaccaggcctggaggaagagctgacc
ctcaaatatggggcaaagcacgtgatcatgctgtttgtgcctgtcacactgtgcatgatt
gtcgtggtggccaccatcaagtccgtgcgcttctacacagagaagaatggacagctcatc
tacactccattcaccgaggacactccctcagtgggccagcgcctcctcaactctgtgctg
aacaccctcatcatgatcagtgtcatcgtggtcatgaccatcttcttggtggtgctctac
aagtaccgctgctacaagttcatccatggctggttgatcatgtcctctctgatgttgctg
ttcctattcacttatatctacctcggagaagtacttaagacctacaatgtggctatggac
tacccgaccctcttcctgactgtctggaactttggggcagtaggcatggtgtgcattcac
tggaagggccccctggtgctgcagcaggcctacctcatcatgatcagcgccctcatggcc
ttggtattcatcaagtacctcccagagtggtctgcatgggtcatcctgggtgccatctct
gtgtatgatcttgtggctgtgctgtgtcccaaagggccactgaggatgctggtggaaact
gcccaagagagaaatgaacccatatttcctgccctgatatactcatctgccatggtgtgg
acagtgggcatggcaaagctggatccctcctctcagggagccctccaactcccatatgac
ccggagatggaagaagactcctatgacagttttggggagccctcataccctgaagtcttt
gaaccccacctgcctggctacccaggggaggagctggaagaagaggaggaaaggggtgtg
aagctcggcctgggagatttcatcttctacagcgtgctggtaggcaaggcggcagccaca
ggcagtggggactggaacaccacgctggcctgctttgttgctattctcatcggtttgtgt
ctcaccctcctgctgctcgctgtgttcaagaaagcgctgcctgccctgcccatctctatc
accttcgggctcatcttctacttctccactgacaacctggtgcgccctttcatggacacc
ttggcctcccaccagctctacatctga

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