Sciurus carolinensis (gray squirrel): 124963308
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Entry
124963308 CDS
T08117
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04621
NOD-like receptor signaling pathway
ncar05132
Salmonella infection
ncar05134
Legionellosis
ncar05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124963308
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124963308
05135 Yersinia infection
124963308
05134 Legionellosis
124963308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncar04054
]
124963308
Pattern recognition receptors [BR:
ncar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124963308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD
CARD
AAA_16
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
124963308
NCBI-ProteinID:
XP_047378916
EnsemblRapid:
ENSSCRG00010017016
LinkDB
All DBs
Position
13:68886739..68924538
Genome browser
AA seq
1024 aa
AA seq
DB search
MNFIKDNSQVLIQRMGMTVTKQIVDDLFVWNVLNSGEVNVICCEKVEQDAARGIIHMILK
KGSEACNLFLKCLEKWNYSLYQDLNGQSLFHQIPEGDLDDLAQDLKDLYQTPSFLNFYPL
GEDIDIIFNLKSTFTEPVLWRKDQHHRRVEQLTLSGLLETLQSPCIIEGESGKGKSTLLQ
RIAMLWASGKCGALRKFKFVFFLRLSRARGGLFETLCGQLLDVPDTIRKHTFMAMLLKLR
QRALFLLDGYNEFKPENCPDIEALIKENHRFKNMVIVTTTTECLRHIRQFGALTVEVGDM
TEDSAQVLIREVLIKELAEGLLLQIQKSRCLKKLMKTPLFVVITCAIQMGESEFHSHTQT
TLFRTFYDLLIHKNRHKHKGSAASHLSRSLEHCGDLALEGVFSHRFDFELEDVSSVNEDV
LLTTGLLCKYTAQRFKPKYKFFHKSFQEYIAGRRLSSLLMSPKPEEVTKGNSYLQKMVSI
SDITSLYSNLLLYTCGSSAEATRAVMRHLAAVHRHGSLLGLSITKRPLWRQESMQSVKNT
TEQEILKAININSFVECGINLFHESISKSALSQEFEAFFRGKSLYINSENIPDYLFDFFE
HLPNCASALDFIKLDFYGGASGSQDKASKDRTRIHMEESSETYIPNRAVSLFFNWKQEFK
TLEVTLRDFSKFNKQDIKYLGKIFSSTASLRLSVKRCAGVAGSLSSVLRTCKNIHSLVVE
ASPLTIEDEQHITSVTNLTTLSIHNLQTQRLPGGLIDSLGNLKNLVKLILDNIKLNEEDA
IKLAEGLTNLKKICLFRLTHLFDIGKGMDYIVKSISGQPCDLEEIQLVSCCLSANSVKTL
AQNLHNLVKLSILDLSENYLGKDGNEALQELIGRLNVLEQLTVLMLPCCRDVRVSLTSLL
EQLGRASQLVKLGLKDWRLTDAEIRALGAFFEENPLKNFQQLDLAGNCVSSDGWLAFMSV
FENLKQLVFFDFSTERFLPDAALVRKLSHVLSKLTLLQEARLIGWQFDDDDISVIKGAFK
LVIA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcataaaggacaatagtcaagtcctcattcaaaggatgggcatgactgttaca
aagcaaatcgtggatgatctgtttgtgtggaatgttctgaacagtggagaagtcaatgtc
atttgctgtgagaaggtggagcaggatgctgcacgagggatcattcacatgattttgaaa
aagggctcagaggcctgcaacctctttcttaaatgccttgaaaagtggaactattctctg
tatcaggacttgaatggacaaagtctttttcatcagataccagaaggagacttagatgat
ttggctcaggatttaaaggacttatatcaaaccccctcttttctgaacttctatcccctg
ggtgaagatattgatattatttttaacttgaaaagtaccttcacggagcctgtcctttgg
cggaaggaccaacaccatcgccgtgtggagcagctgaccctgagtggtctgctggagact
cttcagagcccctgcatcattgaaggggaatcgggcaaaggcaagtccaccctgctacag
agaatcgccatgctctgggcctccgggaagtgtggggccctgcgcaagttcaaatttgtc
ttctttctccgcctaagcagagcccggggtggactctttgaaaccctgtgcggtcagctc
ctggatgtgcccgacacgatcaggaagcacaccttcatggccatgctgctcaagctgcgg
cagagggctctttttctgctcgatggctataatgaattcaagcctgagaactgcccagat
atagaagccctgataaaggagaaccaccgtttcaagaacatggtcattgtcaccaccacc
actgagtgcctgaggcacatcaggcagtttggtgccctgactgtcgaggtgggggatatg
acagaggacagtgcccaggttctcatccgggaagtgctgattaaggagcttgctgaaggc
ttgctgctccaaattcagaaatccaggtgcttgaagaaactgatgaagacccctctcttc
gtggtcatcacttgtgcaatccagatgggtgagagcgagttccactctcacacacaaacc
acactgttccgtaccttctatgatctgctcattcataaaaacaggcacaaacataaaggc
tcagctgcaagtcacttaagccggagcctagagcactgtggagacctggctctggagggg
gtgttctcccacaggtttgactttgagctggaggacgtgtccagcgtgaatgaggatgtc
ctgctgaccactggactcctctgtaaatacacagctcaaaggttcaaaccaaagtataaa
ttctttcataagtccttccaggagtacatagcgggacgcaggctcagcagtttattgatg
tctcccaagccagaggaagtcaccaaggggaacagttacttgcagaaaatggtttccatt
tcagacattacatccctgtacagcaacctgctgctgtacacgtgtgggtcctctgctgaa
gccaccagggctgtcatgagacaccttgcagctgtgcatcgacatggcagcctgctaggg
ctttccatcacgaagaggcctctctggaggcaggaatctatgcaaagtgtgaaaaacacc
actgagcaagaaattctgaaagccatcaacatcaattcctttgtagagtgtggcatcaat
ttattccatgagagtatatctaaatccgccctgagccaagaattcgaagctttctttcgt
ggtaaaagtttgtatatcaattcagagaacattcctgattacctcttcgacttctttgaa
cacttgcctaattgtgcaagtgccctggatttcatcaaactggacttctatggaggagcc
tcaggttcacaggacaaagcatcaaaagatagaacaagaatccacatggaagaatcctca
gaaacctacattcccaacagggctgtgtctttgttcttcaactggaaacaggaattcaag
actctggaggtcacactccgggatttcagcaagttcaataaacaagatatcaaatacctg
ggaaagatattcagctccacagccagcctcagactgtctgttaagaggtgtgctggtgtg
gctggaagcctcagttccgtcctcagaacctgcaagaatattcattccctcgtggtggaa
gccagtcccctcaccatagaagatgagcagcacatcacgtcggtgacaaacctgacgact
ttgagtatccacaacctacagacgcagcggctgccaggtggtctgattgacagcttgggt
aatttgaagaaccttgtgaagctcatactggataacattaagctaaatgaggaagatgct
ataaaactagctgaaggtctgacaaacctgaagaagatatgtttgtttcgtttgacccac
ttgtttgacattgggaagggaatggattacatagtcaagtctatatcaggccaaccctgt
gaccttgaagaaattcaattagtttcctgttgcctttctgcaaattctgtgaaaacctta
gctcagaatcttcataatttggtcaaactgagcattcttgatttatcagaaaattacttg
ggaaaggatggaaatgaagctctgcaggaactgattggcaggttgaacgtcctggaacag
ctaaccgtgctgatgctgccctgctgcagggacgtgcgagtcagcctgaccagcctgctg
gagcaactggggagggcctcacagcttgtcaagctggggctgaaagactggagactcacc
gatgcagagatcagagctttaggtgccttttttgaagagaaccctctgaaaaacttccag
cagttggatttggcaggaaactgtgtgagcagtgatggttggcttgccttcatgagtgta
tttgagaatcttaagcaattagtattctttgacttcagtactgaaagatttttacccgat
gcagcattagtcagaaaacttagccatgtgttatccaagttaactcttttgcaagaagct
aggcttattggatggcaatttgatgatgatgatatcagtgttattaaaggtgcttttaaa
ctagtaattgcttaa
DBGET
integrated database retrieval system
