Sciurus carolinensis (gray squirrel): 124963924
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Entry
124963924 CDS
T08117
Name
(RefSeq) interferon beta-like
KO
K05415
interferon beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04151
PI3K-Akt signaling pathway
ncar04217
Necroptosis
ncar04380
Osteoclast differentiation
ncar04620
Toll-like receptor signaling pathway
ncar04621
NOD-like receptor signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
ncar04623
Cytosolic DNA-sensing pathway
ncar04630
JAK-STAT signaling pathway
ncar04650
Natural killer cell mediated cytotoxicity
ncar04668
TNF signaling pathway
ncar04936
Alcoholic liver disease
ncar05135
Yersinia infection
ncar05142
Chagas disease
ncar05152
Tuberculosis
ncar05160
Hepatitis C
ncar05161
Hepatitis B
ncar05162
Measles
ncar05163
Human cytomegalovirus infection
ncar05164
Influenza A
ncar05165
Human papillomavirus infection
ncar05167
Kaposi sarcoma-associated herpesvirus infection
ncar05168
Herpes simplex virus 1 infection
ncar05169
Epstein-Barr virus infection
ncar05170
Human immunodeficiency virus 1 infection
ncar05171
Coronavirus disease - COVID-19
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
124963924
04668 TNF signaling pathway
124963924
04151 PI3K-Akt signaling pathway
124963924
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124963924
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124963924
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124963924
04621 NOD-like receptor signaling pathway
124963924
04622 RIG-I-like receptor signaling pathway
124963924
04623 Cytosolic DNA-sensing pathway
124963924
04650 Natural killer cell mediated cytotoxicity
124963924
09158 Development and regeneration
04380 Osteoclast differentiation
124963924
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124963924
05161 Hepatitis B
124963924
05160 Hepatitis C
124963924
05171 Coronavirus disease - COVID-19
124963924
05164 Influenza A
124963924
05162 Measles
124963924
05168 Herpes simplex virus 1 infection
124963924
05163 Human cytomegalovirus infection
124963924
05167 Kaposi sarcoma-associated herpesvirus infection
124963924
05169 Epstein-Barr virus infection
124963924
05165 Human papillomavirus infection
124963924
09171 Infectious disease: bacterial
05135 Yersinia infection
124963924
05152 Tuberculosis
124963924
09174 Infectious disease: parasitic
05142 Chagas disease
124963924
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124963924
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
124963924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ncar04052
]
124963924
Cytokines and neuropeptides [BR:
ncar04052
]
Cytokines
Interferons
124963924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
124963924
NCBI-ProteinID:
XP_047379606
LinkDB
All DBs
Position
14:complement(49581157..49581720)
Genome browser
AA seq
187 aa
AA seq
DB search
MNNRCFLQITLLLCFSTTSLSFSYKLCALQQSNSILKCQELLMQLNGRPEDCLNDTMDFK
IPEEIKHPQQFQKEHAAFVTYEMLQNIYALFTRGFSNTGWNETVVKDLLVGLHQQMDLLE
TTLEEKLGEENMHWGNSMTILHLKSYYWRILRYLKAKEFSSCAWTVVQSELFRNFSFITR
LTDDFQS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaggtgcttcctccaaatcactctcctgttgtgcttctctaccacatctcta
tccttcagttacaaactgtgtgcactccaacagagcaacagcattttgaaatgtcaggag
ctcctgatgcagttgaatgggaggcctgaagactgcctcaatgacacgatggacttcaag
atccctgaggagatcaagcatccacagcagttccagaaggagcatgctgcctttgtcacc
tatgagatgctccagaacatctatgctcttttcacaagaggcttctctaacactggctgg
aatgagaccgttgtcaaggacctccttgttggactccatcagcagatggacctcctggaa
acaactctggaggagaaactaggagaggaaaacatgcactggggaaactccatgaccatc
ctgcatctgaagagctactattggaggatcctgaggtacctgaaggccaaggagtttagc
agctgtgcctggacggtagtccaaagtgaactcttccggaacttctccttcattaccaga
cttacagatgacttccaaagctga
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