KEGG   Sciurus carolinensis (gray squirrel): 124965019
Entry
124965019         CDS       T08117                                 
Name
(RefSeq) interferon beta-like
  KO
K05415  interferon beta
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04060  Cytokine-cytokine receptor interaction
ncar04151  PI3K-Akt signaling pathway
ncar04217  Necroptosis
ncar04380  Osteoclast differentiation
ncar04620  Toll-like receptor signaling pathway
ncar04621  NOD-like receptor signaling pathway
ncar04622  RIG-I-like receptor signaling pathway
ncar04623  Cytosolic DNA-sensing pathway
ncar04630  JAK-STAT signaling pathway
ncar04650  Natural killer cell mediated cytotoxicity
ncar04668  TNF signaling pathway
ncar04936  Alcoholic liver disease
ncar05135  Yersinia infection
ncar05142  Chagas disease
ncar05152  Tuberculosis
ncar05160  Hepatitis C
ncar05161  Hepatitis B
ncar05162  Measles
ncar05163  Human cytomegalovirus infection
ncar05164  Influenza A
ncar05165  Human papillomavirus infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05169  Epstein-Barr virus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05171  Coronavirus disease - COVID-19
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    124965019
   04668 TNF signaling pathway
    124965019
   04151 PI3K-Akt signaling pathway
    124965019
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124965019
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124965019
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124965019
   04621 NOD-like receptor signaling pathway
    124965019
   04622 RIG-I-like receptor signaling pathway
    124965019
   04623 Cytosolic DNA-sensing pathway
    124965019
   04650 Natural killer cell mediated cytotoxicity
    124965019
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124965019
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124965019
   05161 Hepatitis B
    124965019
   05160 Hepatitis C
    124965019
   05171 Coronavirus disease - COVID-19
    124965019
   05164 Influenza A
    124965019
   05162 Measles
    124965019
   05168 Herpes simplex virus 1 infection
    124965019
   05163 Human cytomegalovirus infection
    124965019
   05167 Kaposi sarcoma-associated herpesvirus infection
    124965019
   05169 Epstein-Barr virus infection
    124965019
   05165 Human papillomavirus infection
    124965019
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    124965019
   05152 Tuberculosis
    124965019
  09174 Infectious disease: parasitic
   05142 Chagas disease
    124965019
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124965019
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    124965019
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124965019
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  Interferons
   124965019
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 124965019
NCBI-ProteinID: XP_047381798
LinkDB
Position
14:49540313..49540870
AA seq 185 aa
MNNRCSLQIALLLCFSTTTLSLSYKLLALQQSNSILKCQELLMQLNGRPEDCLNDTMDFK
IPEEIKHPQQFQKEHAAFVTYEMLQNIYALFTRDFSNPGWNETIVKDLLVGLHQQMDLLE
TTLEEKLGEENVHWGNSILYLKSYYWRILRYLKAKEFSSCAWTVVQSELFRNFSFITRLT
DDFQS
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaacaacaggtgcagtcttcaaatcgccctcctgttgtgcttctccaccacaactcta
tccctcagttacaaactgcttgcactccaacagagcaacagcattttgaaatgtcaggaa
ctcctgatgcagttgaatgggaggcctgaagactgcctcaatgacacgatggacttcaag
attcctgaggagatcaagcatccacagcagttccagaaggagcatgctgcctttgtcacc
tatgagatgcttcagaacatctatgctcttttcacaagagacttctctaaccctggctgg
aatgagaccattgtcaaggacctccttgttggactccatcagcagatggacctcctggaa
acaactctggaggagaaactaggagaggaaaacgtacactggggaaactccatcctgtat
ctgaagagctattattggaggatcctgaggtacctgaaggccaaggagtttagcagctgt
gcctggacagtagtccaaagtgaactcttccggaacttctccttcattaccagacttaca
gatgacttccaaagctga

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