KEGG   Sciurus carolinensis (gray squirrel): 124965289
Entry
124965289         CDS       T08117                                 
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124965289
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    124965289
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C VIGSSK Colicin
Other DBs
NCBI-GeneID: 124965289
NCBI-ProteinID: XP_047382089
LinkDB
Position
15:5823224..5935577
AA seq 1547 aa
MDPEAQRPRAEPARKDRWLPGERCLAPSPRDEKLCEASIKSITVDENGKSFAVVLYSDFQ
ERKIPLKRLQEVKSAKGCPRNFIFDDEDLEKPFFPDRKFPSSANAFKLSEDGDSIPYTIN
RYLRDYQREGAQFLYGHYIQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMP
EFLLRSMKKEPLSSTVKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNKKDNELLRIK
QRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIRNPKARVTEAMKALKCNVRIGLT
GTILQNNMKELWCVMDWAVPGLLGSRSHFKKQFSDPVEHGQRHTATKRELATGRKAMRRL
AKKMSDWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSKPCT
CGSGRKRRNCCYKTNSHGESVQTLYLSYLTVLQKVASHVALLQAAGASRQQETLIKRICD
QVFSKFPEFVQKSKDSSFETLSDPKYSGKMKVLQQLLNHFRKNRDKVLLFSFSTKLLDVL
QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVIL
FDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSEN
AKRYFEAVQGSKEHRGELFGTYNLFKLRAQGSCLTRDILEREGQVEAGIMTATTWLKEEP
SAHELGTPREPDCQEPRGRDLPAEPLAVEACDPCSDFSDDESVRTSRRKTAKKASDSNQT
PGSSGQLTLLQCGFSKLLEAKRPAVEDSDGNTASDGGSSEEQPMCLPAEAKDGGRQKTQD
PVATSKPQKLDNTLDPNEKCVFDKSEKVLEQSVSSESDVEKNSAHTAGRQCIIQSGTESE
DSDIILPTQYTVPPFPNNRTRYKPPLDESEGSETENPVKTRSSGDGEQTDDRRSGLIAKV
SNPESRTPKPIMKRQDTGNISDESDDIEIYPETRVRKQRATHLLRLRRKKENKRKPCSFP
KTRKKTNQLCATDEDSNSQLIDDFSSSDDNISVSHFSDSKQSYRTKTIKDKICFSSKLPS
HDMKINTFTPRKSMKFSNERVANQEQLYESMDKILDGVQEVAYIHSNQHVIGSSKAENHM
SRWAARDVFELKQFSQLPANVAICSSETYKEKVNTDTVTHTKKDQPPSEGSISFPLCISH
PVCQKKKKVHRTDQTTFIIGETPKGIRRKQFEEMASYFNFSSVKEFANYVTNATSEERQK
MLRDFYASQYPEVKELFVDSASEFIKSARKEGKNIRNKYEERDSLKKAKPSHSKILSFKD
CTNQISQICSPKVSKGKSISFQSYGACREKTLPSDAETPRSPLSTTQEKDRRACRDPTTS
RSLNSTPKAQERQLENITQDRKDLAGTGISGNRPLFKSENRQAENPALGNASVEGLLGDT
SILDDLFKSHGNSPTQLPKKVLSGPVEKAKQRPKDFWDILNEQNEDHLSKLTDVAVIETL
CEKAPIATRSRRKEGLETSLWKSNEKFLWKTLNSSDTDENTSNTQSG
NT seq 4644 nt   +upstreamnt  +downstreamnt
atggatcccgaggcccagaggccgcgcgcggaacccgcccgcaaagacaggtggcttcca
ggagaaagatgtcttgctccttctccacgcgatgaaaaactttgtgaagcgagcataaaa
tctatcacagtggatgaaaatggcaagtcatttgccgttgtcttatattcagattttcaa
gaaaggaaaatacctcttaaaagacttcaagaagtaaagtctgctaaaggttgccccagg
aattttatattcgatgatgaagatttggaaaagccttttttcccagatcgaaaattccca
tcatctgccaatgcctttaaattatctgaagatggagactctattccttatactattaat
aggtatttgagagactaccaaagggaaggcgcccagtttctctatggacactatatccaa
ggaagaggatgtattcttggtgatgacatgggacttggaaaaacagtacaggttatttca
tttctggccgcagttttacataaaaagggaacgcgtgaagatattgaaaataacatgcca
gaatttttactaagaagtatgaagaaggaacccctttcttctacagtaaaaaagatgttc
ttaatagttgctcctctttctgtcctctacaactggaaggatgaattagatacctggggg
tatttcagagtcactgttttacatggtaacaaaaaagacaatgaactgctccggataaag
cagaggaaatgtgaaattgctctaacaacttatgaaacgctgcgcttgtgtctggatgaa
cttaacagtttggagtggtcagccatcattgtagatgaagctcatagaatcaggaatcca
aaggcaagagtaacagaagctatgaaagctctaaagtgtaacgttcgcatcggcctcact
ggaaccattcttcagaacaacatgaaggaactgtggtgtgttatggactgggctgtgcca
ggacttttaggtagcaggtcccacttcaaaaagcagttttctgacccggtagaacacggt
cagagacacacagcaaccaaaagagaactagctactggccgaaaggccatgcgaaggctt
gcaaaaaagatgtctgactggtttctcaggcggaccaagactcttatcaaggatcaattg
cctaagaaggaagaccggatggtttattgctctctgacagatttccagaaagctgtctat
caaacagtgttagaaacagaagatgtgactctgatacttcaatcttctaagccttgtacc
tgtggcagtggccgaaaaaggagaaattgttgttataagaccaattcccatggagagagc
gtgcaaaccttgtacctcagttacctcacagtcctgcagaaggtcgccagccacgtcgca
ctgctgcaagctgcaggggcctccagacaacaggaaacacttatcaaaaggatatgtgat
caggtattttccaaattcccggaatttgtgcagaaaagcaaagattcatcctttgaaact
ctttctgaccctaaatacagcgggaaaatgaaggttcttcagcagcttttaaatcatttc
agaaaaaacagagataaggttcttcttttctctttttccaccaagttgcttgatgtgctc
cagcaatactgtatggcatctgggctcgattaccggagacttgatggaagtacaaaatca
gaggaaagactcaagatcgtgaaagagttcaacagcactcaagatgttaacatttgcctt
gtctctaccatggctggtggacttggcctcaattttgttggtgccaatgttgttatatta
tttgatccaacttggaatccagccaatgatcttcaagccattgacagagcatacaggatt
ggacagtgcagagatgtcaaagtgcttaggctgatatccttgggaactgtggaggagatc
atgtatttacgacaggtatacaaacagcaacttcactgtgtggtagttggaagtgaaaat
gccaagcgatattttgaagcagttcaaggatcaaaagagcatcgaggagaactttttggg
acctataacctcttcaaactaagagcccaaggatcttgtcttacgagggacatcctggag
agagaaggccaagtggaagcaggaatcatgaccgcaacaacgtggttgaaagaggaacct
tcagcacatgaattaggaacgcccagggagcctgactgtcaagaacccagaggacgagac
ctacctgcagagccactggcagtggaagcatgtgatccttgcagtgactttagtgatgat
gaatcagtgagaacctcaagaagaaagactgctaaaaaagcatctgattcaaatcagact
ccaggttcttcagggcagcttaccttactccaatgtggtttctctaaactgttggaagca
aaacgtccagcagttgaagatagcgatggaaatactgcatctgatggtggaagttctgag
gagcagcccatgtgccttccagcagaagccaaagatggtggccgtcagaaaactcaggac
cctgttgctacttcaaaacctcagaaattagataacaccctagatccaaatgaaaaatgt
gtttttgataaaagtgagaaagtgttagaacagagtgtttcttctgaatctgatgttgaa
aaaaactctgcacatacagctggacgtcagtgcattatacagagtggcaccgaatcagaa
gacagtgacatcatccttcccacacagtatacagttcccccattccctaacaatcgaacc
aggtacaagccaccgttggatgaatctgaaggttctgaaacagaaaaccctgtaaaaaca
agaagcagtggtgatggtgaacagactgatgacagaagaagtgggctaatcgcaaaggtt
tcaaatcctgagagcaggaccccgaaacctattatgaaaagacaagacactggcaatatt
agcgatgaatctgatgacattgaaatttaccccgagacgagagtaagaaaacaaagagct
actcatttattgaggcttaggaggaaaaaggaaaacaaaagaaaaccttgcagttttcct
aaaacaagaaagaaaacaaaccaattgtgtgcaacagatgaggacagtaactctcaactt
attgatgacttttcatcctcagatgacaatatatctgtcagccacttcagtgactctaaa
cagagctatagaacaaaaactataaaagacaaaatctgtttctcttcaaaattgcctagt
catgatatgaaaattaacacttttacaccgagaaaatcaatgaaattttcaaatgagaga
gttgccaatcaagagcagctgtatgaatcaatggataaaattttagatggtgttcaggaa
gtggcttatattcactccaaccagcatgtgattggatctagcaaagctgaaaatcacatg
agccggtgggcagcgagggacgtgtttgagttgaagcagttttcccagcttcctgccaat
gtagctatctgcagttccgagacatacaaagaaaaagtgaacacagacacagtgacacat
acaaagaaagaccagccaccaagtgagggatccatttcctttcctctgtgcatttcacac
cctgtgtgtcagaagaagaaaaaagtccaccgtacagaccagactacctttataattgga
gaaacaccaaaaggaatccgcagaaaacaatttgaagaaatggcctcttactttaacttc
tcttctgtaaaagaatttgctaactatgtaactaatgccacttcagaagaacgacagaaa
atgctaagagacttttatgcttctcagtatccagaggtcaaagaactttttgtggattct
gcttcagaattcatcaaatctgcccgcaaggaaggaaagaatatcagaaataaatatgaa
gaaagagactctcttaagaaagcaaagccatcacattctaaaattttgtcctttaaagat
tgtaccaaccaaatttctcaaatttgtagtccaaaagtatctaaaggaaaatcaattagc
tttcagagttatggcgcctgtagggaaaagacccttcccagtgatgcagaaactcccaga
tcaccccttagcactactcaagagaaagacaggcgagcctgcagagaccccaccacctcc
cgctcgctcaacagcacccccaaggcacaggagaggcagctagaaaatatcacgcaagac
cgaaaggacctcgcaggaacaggcatctcaggaaacagaccccttttcaagtcagaaaac
agacaggcagaaaatccagccttaggaaatgcttctgtggaaggcttgcttggtgacacc
tctattcttgatgacctctttaaaagtcatgggaacagtcccacacaactgccaaagaaa
gttctttcagggcccgtggaaaaagcaaagcagagaccaaaagacttctgggacatcctg
aatgagcagaatgaggaccatctcagtaaactgactgacgtggcagtcatagagaccctg
tgtgaaaaagcccccattgccacccgctccagaaggaaagaggggctggaaacctccctc
tggaaatccaatgagaagtttctgtggaaaacattgaactcgagtgatacagatgaaaac
acaagcaacacgcagagcgggtga

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