KEGG   Sciurus carolinensis (gray squirrel): 124965666
Entry
124965666         CDS       T08117                                 
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A-like isoform X1
  KO
K05147  tumor necrosis factor receptor superfamily member 11A
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04060  Cytokine-cytokine receptor interaction
ncar04064  NF-kappa B signaling pathway
ncar04380  Osteoclast differentiation
ncar04917  Prolactin signaling pathway
ncar05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    124965666
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124965666
 09150 Organismal Systems
  09152 Endocrine system
   04917 Prolactin signaling pathway
    124965666
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124965666
 09160 Human Diseases
  09163 Immune disease
   05323 Rheumatoid arthritis
    124965666
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ncar04050]
    124965666
   04090 CD molecules [BR:ncar04090]
    124965666
Cytokine receptors [BR:ncar04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   124965666
CD molecules [BR:ncar04090]
 Proteins
  124965666
SSDB
Motif
Pfam: RANK_CRD_2 TNFR_c6 Chordopox_A13L Cation_efflux
Other DBs
NCBI-GeneID: 124965666
NCBI-ProteinID: XP_047382722
LinkDB
Position
15:68029071..68090446
AA seq 625 aa
MAPRARRRGPLPALLALCALFTALQVTFQVTSPCPSDRHYEHLGRCCSRCEPGKYMSSKC
TTTSDSVCLPCGPDEYLDTWNEEDKCLLHKVCDTGKALVAVDPGNRTAPRRCACTAGYHW
SQDCECCRRNAECAPGFGAQHPLQLNMDTVCRPCHVGYFSDAFSSTDKCKPWTNCTILGK
TEEHPGTEKSDVVCSSSLPSRKPPKEHRIYLPSLIVLLLFISVALVAVVVFGVYHRKKGK
ALTADLWHWINDVCSHLSGNKASSGDSCISAPSAGSSQCEVCEGVLLLTLEKMIPEAVCC
ADGAAICGDACAGGEPCAQGEDARMFSLVSEVEMEVDPSRQVPTEDEYMDRPSQPADCLL
LLTQPGSKSAAPFPEPLEVGENDSLSQCFSGTESTVDSESCNFMVPPGRTDWIPVSPEKY
LQKEVEGGSCAPWAASSSVGDSYSGCGNPPGEDHEPLMGSLKHGPLPQCAHGMGPPSEEE
AGSAEGADQPADGADGRPPSSARGSAGSGTSPSDQPPASGNVTGNSNSTFISSGQVMNFK
GDIIVVYVSQTSQEGAAGPGAAAEPVGRPVQEETLARRDSFAGNAPRFPDSCAGAEARLG
AGLQEQGAPGPEKASRPVQEQGAAA
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggccccgcgcgcccggcggcgcggcccgctgcccgcgctgctggcgctctgcgcgctg
ttcaccgcgctgcaggtgaccttccaggtcacttctccatgccccagtgacaggcattat
gagcatcttgggcgctgctgcagcagatgcgagccaggaaagtacatgtcctccaaatgc
actactacctctgacagtgtgtgtctgccctgtggcccggatgaatacctggatacctgg
aatgaagaagataaatgcttgctgcataaggtttgcgatacaggcaaggccctggtggcc
gtggaccccggcaaccgcacggccccgcggcgctgcgcctgcaccgccggttaccactgg
agccaggactgcgagtgctgccgccgcaacgccgagtgcgcgccaggcttcggcgcccag
caccccttgcagctcaacatggacacggtgtgcaggccttgccacgtgggctacttctca
gatgccttttcttccacagacaaatgcaaaccctggaccaattgtaccatccttggaaag
acagaggaacatcctggaacggagaaatcagatgtggtttgcagttcttctctgccatct
agaaaaccaccaaaggaacaccggatttacttgcccagtttaattgttctgcttctcttc
atatctgtggccttagttgctgttgtcgtctttggtgtttaccataggaaaaaagggaaa
gcactaacagctgatttgtggcactggatcaatgatgtttgcagtcatctaagtggaaat
aaggcgtcctccggcgacagctgtatcagcgctccctcggcgggctctagtcagtgtgaa
gtgtgtgaaggtgtcttactgctgacactggagaagatgattccagaagccgtgtgctgt
gcagacggtgctgccatctgtggggatgcgtgtgcaggaggtgagccctgtgcacagggc
gaagatgccaggatgttctccttggtcagcgaggtggagatggaggtggaccccagcagg
caggttcccacggaagacgagtacatggacaggccctcgcagcccgcagactgcctactg
ctactgacccagcctggaagcaaatccgcagcccctttccctgagcccctggaggtgggg
gagaatgacagtctaagccagtgcttctcagggacggagagcacggtggattcagagagc
tgcaacttcatggtgcccccgggcagaactgactggattcctgtgtcccccgaaaagtac
ttgcaaaaagaggtggagggtggcagttgtgccccctgggcagccagctccagcgtgggg
gacagctactcaggatgtgggaaccctcctggggaggaccatgagcccctgatgggttct
ctgaaacacggacctttgccccagtgcgcccatggcatgggccctccctccgaagaagag
gctggtagtgcagagggggcagaccagcctgcggacggggctgacgggcggccgccaagc
tcagccaggggaagtgctgggtctggaacctcccccagtgaccagccacctgcatctgga
aacgtgactgggaacagcaactccacgttcatctccagcgggcaggtgatgaacttcaag
ggcgacatcatcgtggtctacgtcagccagacgtcgcaggagggcgcggcggggccgggg
gccgcggcggagccggtgggccgcccggtgcaagaggagacgctggcgcgccgcgactcc
ttcgcgggcaacgcgccgcgcttcccggactcgtgcgcgggcgccgaggcgcggctgggc
gcggggctgcaggagcagggcgcgccggggcccgagaaggcctcgcggccggtgcaggag
cagggcgcggccgcgtga

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