Sciurus carolinensis (gray squirrel): 124967283
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Entry
124967283 CDS
T08117
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04270
Vascular smooth muscle contraction
ncar04611
Platelet activation
ncar04810
Regulation of actin cytoskeleton
ncar04928
Parathyroid hormone synthesis, secretion and action
ncar05135
Yersinia infection
ncar05163
Human cytomegalovirus infection
ncar05200
Pathways in cancer
ncar05205
Proteoglycans in cancer
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124967283
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
124967283
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
124967283
09153 Circulatory system
04270 Vascular smooth muscle contraction
124967283
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124967283
05205 Proteoglycans in cancer
124967283
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
124967283
09171 Infectious disease: bacterial
05135 Yersinia infection
124967283
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124967283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124967283
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124967283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
124967283
NCBI-ProteinID:
XP_047385366
LinkDB
All DBs
Position
16:complement(51783631..51802973)
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AA seq
971 aa
AA seq
DB search
MEDIARGVAPGPPRPGMVPVSIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLMA
LLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLDKTAVLRVLVPPNVAFE
LDRTRPDLISEDVQRRFVQEVVQSQQAAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGR
DRTSYEARERHVAERLLTHLEEMQHTISTDEEKSAAVVTAISLYMRHLGVRTKSGDKKSG
RNFFRKKVMGNKRSDEPPKTKKGLSSILDAARWNRGEPQAPDFRHLKSEVDAEKPGPTDR
KGGLGVPSRDRNVGASGQDIPGVSLHPLSGDSPDREPGVDAPLELGDPPPQGTMNLEPPA
PPESTEEGAETERRWKRLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPS
SATAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPPDTLLSLPKSQVKRQEVI
SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKR
RQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQ
DAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAAECCREILHH
VNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKD
KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD
HKAFYVIFTWDQEAQIYELVAQTISERKNWCALITETAGSLKVPAPASRPKPRPSPSSTR
EPLLSTSENGNCGREMPPADARTERILSDLLPFCRPGPEGQLAATALQKVLSLKQLLFPV
EEDNGAGPPRNGDGVLGGSSLGPAQTQEIQENLLSLEEAIKQLEELEEELCRLRPLLSQL
GGNTVPQPGCT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgcccgaggggtggctccagggcccccacggcctggcatggtgcctgtc
agcatcattggggctgaggacgaggatttcgagaatgagctggagacgaactcagaggag
caaaacagccagttccagagcctggagcaggtgaagcggcgccccgcccacctcatggcc
ctcctgcagcatgtggccctgcagtttgagccaggacctctgctctgctgcctgcatgcg
gatatgctgggctcgctgggccccaaggaggccaagaaggccttcctcgacttctaccac
agcttcctggataagaccgcggtcctacgggtgctggtccctcccaacgtcgcctttgaa
cttgaccgcacgcggcctgacctcatctctgaggatgtccagaggcggttcgtgcaggag
gtggtgcagagccagcaggcagccgtgggccggcagctggaggacttccgctccaagagg
ctcatgggcatgacgccctgggagcaggagctggcccagctggaggcctgggtcgggcgg
gaccgaacgagctatgaggcccgcgaacggcatgtggccgagcgactgctgacccacctg
gaggagatgcaacataccatctccaccgatgaagaaaagagtgctgctgtggtcactgcc
atcagcctgtacatgcgacacctgggggtgcggaccaagagcggggacaagaagtcgggg
aggaacttcttccggaaaaaggtgatggggaacaagcggtcagacgagcctcccaagacc
aagaaaggtctgagcagtatcctggatgctgctcgctggaaccggggagagccccaggct
ccagattttcgacacctcaaaagcgaggttgatgctgagaagccaggccctacagaccgg
aagggaggcctgggagtgccttctcgggaccggaacgttggggcttctggacaggacatc
cctggagtctctctgcaccctctgtctggagacagcccagaccgggaaccaggtgtggat
gctcccctggagctgggggacccacccccacagggcacaatgaacctggagcccccagcg
cctccagagagcacagaggagggtgctgagacggagagaaggtggaagaggctatcaggg
cgtctggggcgctcagagagcctgcgggtgagcgaccgccgccggccttcccggggcagc
ctcggggctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagc
tccgccacggccgtgcttggccctgcccgacgagccacccctgagcctggagatgagggg
gagccagggcggtcaggactggagctggagccagaagagcctcctggctggcgggagctc
gtccccccggacaccctcctcagcctgcccaaaagccaggtgaagcggcaggaggtgatc
agcgagctgctggtgacagaggcggcccatgtgcgcatgctgcgggtgttgcatgacctc
ttctaccagcccatggctgacgggggcttctttcctctggaggaactgcagaacatcttc
cccagcctggatgagctcatcgaggtgcactccctgttcctcgatcgcctgatgaaacgg
agacaggaaagtggctacctcattgaagagattggagacgtgctgttggcccggttcgat
ggtgccgagggctcctggttccagaaaatctcctcccgcttctgcagccgccagtcattt
gccttagagcagctcaaagccaaacagcgcaaggagcctcgattctgtgccttcgtgcag
gacgctgagagccgcccacggtgccgccgcctgcaactgaaggacatgatccccaccgag
atgcagcggctgaccaagtacccgctgctcctgcagagcatcgggcagaacacagaagag
cctacagaacgggagaaagtggagctggcagccgagtgctgccgggagattctgcaccac
gtcaaccaagccgtgcgtgacatggaggacctgctgcggctcaaggattaccagcggcgc
ctggacttgtcccacctgcggcagagcagcgaccctatgctgagcgagttcaagaacctg
gacatcaccaagaagaagctggtgcacgagggtccattgacgtggcgagtgaccaaggac
aaggctgtggaggtccacgtgctgctactggacgacctactcctgctgctccagcgccag
gatgagaggctgctgctcaagtcacatagccgaacactgacgcccacgcccgacggcaag
accatgctgcgacccgtgttgcggctcacctctgccatgacccgcgaggtggccaccgat
cacaaagccttctacgtcatttttacctgggaccaggaggcccagatatacgagctggta
gcacagaccatatcagagcggaagaactggtgtgccctcataactgagactgctggatcc
ctgaaggtccccgcccctgcctcccgccctaagccccggcccagcccaagcagcacccga
gaacccctgctcagcacctctgagaatggcaactgtggccgagagatgccgccagctgac
gctcggacggagagaatcctcagtgacctcctgcccttctgcagaccaggccccgagggc
cagcttgccgccacagcccttcagaaagtgctgtccctgaagcagctcctgtttcctgtg
gaggaagacaatggggccgggcctcctcggaatggggatggggtgctaggtggcagctcc
ctgggcccagcacagacccaggaaattcaggagaacctgctcagcctggaagaggccata
aagcagctagaggaattggaggaggaactttgccgcctgcgacctctcttgtctcagctc
ggggggaatactgtcccccagcctggctgcacctga
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