Sciurus carolinensis (gray squirrel): 124967582
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Entry
124967582 CDS
T08117
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04082
Neuroactive ligand signaling
ncar04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124967582
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
124967582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124967582
Transporters [BR:
ncar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124967582
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124967582
NCBI-ProteinID:
XP_047385981
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Position
16:complement(28257579..28297891)
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AA seq
616 aa
AA seq
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MLLARMNPQVQPKNSEEDPEPEPLPACKTADLLVVKERNGVQCLLAPRNSDAQPRETWGK
KIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNR
EGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTFNLPWTDCGHAWN
SPNCTDPKLLNGSVLGNHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCL
LSVVVALYFSLWKGVKTSGKVVWITATLPYLVLFVLLVHGTTLPGASDGINAYLHIDFYR
LKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAI
FSILGYMAHEHKVNIEDVATEGAGLVFILYPEAISTLSGSTFWAILFFIMLLALGLDSSM
GGMEAVITGLADDFQVLKRNRKLFTFGVTVGTFLLALFCITKGGIYVLTLLDAFAAGTSI
LFAVLMEAIGVSWFYGVDRFSNDIQQMMGFKPGLYWRLCWKFFSPAFLLFVVVVSIINFK
PLTYDEYVFPLWANWVGWGIALSSMVLVPAYVIYKFLSTRGSLWERLAYGITPENEHHLV
AERDVRQFQLKHWLAI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcttctggcgcgaatgaacccgcaggtgcagccgaagaacagcgaggaggatcctgaa
ccggagcccttgccggcttgcaaaactgcggatctgctggtggtgaaggaacgaaacggc
gtccagtgcctcctggcgccccgtaacagcgatgcgcagccgcgtgagacctggggcaag
aagatcgacttcttgctgtcggtggtcggctttgccgtggacctggccaacgtgtggcgc
ttcccctacctctgctacaagaatggtggcggtgccttcctgattccatacactctgttc
cttatcattgctgggatgcccctgttctacatggagctggctcttgggcagtacaaccgg
gaaggcgcagccacggtctggaagatctgtcctttcttcaaaggagtcggctatgctgtg
atcctcatcgccctctacgttggcttttactacaacgtcatcatcgcctggtcgctgtac
tacctcttcgcctccttcaccttcaacctgccctggaccgactgtggccatgcctggaac
agccccaactgcaccgaccccaagctcctcaatggctccgtgctgggcaaccacaccaag
tactccaagtacaagttcacgccagcagcagagttttatgaacgtggcgtcctgcatctt
cacgagagcagcgggatccacgacattggcctgccccagtggcagctcctcctctgcctc
ctgtccgtcgtcgtcgccctgtatttcagcctctggaaaggcgtgaagacgtcagggaag
gtggtgtggatcacggccacgctgccttacctcgtgctcttcgtgctcctggtccacggc
accacgctgcccggcgcctccgacggcatcaacgcctacctgcacatcgacttctaccgc
ctaaaagaggccacggtatggattgatgctgcaactcagatatttttttccttgggggct
ggatttggagtcttgattgcatttgccagttacaacaaatttgacaacaactgttacagg
gacgccctgctgaccagtaccatcaactgtgtcaccagctttatctctgggtttgccatc
ttctccatcctcggttacatggcgcatgagcacaaggtcaacattgaggacgttgccact
gaaggggctggcctggtgttcatcctgtatccagaagccatttccaccctgtcgggatcg
acgttctgggctatcttgtttttcatcatgctcctggctctgggccttgacagctcaatg
ggaggcatggaggccgtcatcacgggcctggccgacgacttccaggtcctgaagcgaaac
cggaaactcttcacgtttggcgtcacggtgggcactttcctcctggccctgttctgcata
accaagggtggaatttacgtgctgactctgctggacgccttcgcggctggcacctccatc
ctcttcgctgtgctcatggaagccattggagtgtcctggttctatggtgtggacaggttc
agcaacgacatccagcagatgatggggttcaagcccggcctgtattggagactgtgctgg
aagttcttcagccccgccttcctcctgttcgtggtggtggtcagcatcatcaacttcaag
ccgctcacctatgacgaatacgtcttcccgctctgggccaactgggtgggctggggcatc
gccctctcctccatggtcctggttcccgcctacgtcatctacaagttcctcagcacgcgg
ggctccctgtgggagagactggcctatggcatcacaccggagaatgagcaccacctggtg
gcggagagggacgtccggcagttccagctgaagcactggctggccatctga
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