Sciurus carolinensis (gray squirrel): 124968988
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Entry
124968988 CDS
T08117
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04550
Signaling pathways regulating pluripotency of stem cells
ncar05166
Human T-cell leukemia virus 1 infection
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124968988
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124968988
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124968988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124968988
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
124968988
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Gene cluster
GFIT
Motif
Pfam:
HLH
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
124968988
NCBI-ProteinID:
XP_047387776
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Position
17:complement(670071..702140)
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AA seq
650 aa
AA seq
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MSQSQRMAPVGTDKELSDLLDFSMMFPLPVANGKGRPASLTGAQFTSSGLEDRPSSGSWG
TGDQNNSSFDPSRAYSDGAHFSEAHGSLSSSTFLGPGLGGKGGERGACATFGRDTGVGSL
TQAGFLPGELALSSPGPLSPSGIKGSSQYYSSYPSNPRRRAADSGLDTQPKKVRKVPPGL
PSSVYPPSSGDDFGRDTAAYPSAKTPSSTYPSPFYMADSSLHPAAELWSSPGQAGFGPML
GGGSSPLPLTPGSGGPVSSSTFSGLHQHERVGYQLHGAEVNGGLPAVSTFSSAPGAPYGS
VSSHTPPVSGAEGLLGSRGTTAGSSGDALGKALASIYSPDHSSSNFSPSPSTPVGSPQGL
PGTSQWPRAGAPGALSPSYDGGLPGLSKMEDHLDEAIHVLRSHAVGTAGDVHGLLPGPGV
LASSFVGPLPLGGRHTGLVGSGHPEDGLAGSASLLHNHTALPSQPGTLPDLSRPPDSYSG
LGRAGAAVAAGEIKREEKEDEENASVADNSEEERKELKGSRARTSPDEDEDDLLPPEQKA
EREKERRVANNARERLRVRDINEAFKELGRMCQLHLSSEKPQTKLLILHQAVSVILHLEQ
QVRERNLNPKAACLKRREEEKVSGVVGDPPMVLSGSHPGLSEAHNPTGHM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcgcagaggatggcccctgtgggcaccgacaaggagctcagtgaccttctg
gacttcagcatgatgttcccactgcctgtggccaatgggaagggccggcctgcctccctg
acaggagcccagttcacaagttcaggcctcgaggaccggcccagctcgggttcctggggc
actggtgaccagaacaattcctccttcgaccccagccgggcctacagtgatggtgcccac
ttcagtgaggcccacggcagcctttcttcgtccacattcctgggacctggacttggaggc
aagggcggtgagcggggcgcctgtgccaccttcgggagagatactggcgttggcagcttg
actcaggctggcttcctgcctggcgaactggccctcagcagccccgggccgctctccccc
tctggcatcaagggcagctcccagtattactcctcgtaccccagcaaccctcggcggaga
gctgcagacagtggcctggacacacagcccaagaaggtccggaaggttccgcctggtctt
ccttcctcggtgtacccgcccagctcgggggacgactttggcagggacacagccgcctac
ccctctgccaagacccccagcagcacctaccccagccccttctacatggcagacagcagc
ctgcaccccgcggcggagctctggagcagccctggccaggcgggcttcgggcccatgctg
gggggcggctcctcccccttgcccctcacaccgggcagcggtggtcctgtgagcagcagc
accttcagcggcctgcaccagcacgagcgcgtgggctaccagctgcatggagcggaggtc
aatggcgggcttccggccgtgtccaccttctcctcagcccctggagctccttacggcagc
gtctccagccacaccccgcccgtcagtggggctgagggcctcctcggctcccgtgggacc
acggctggcagctctggggacgcccttgggaaggctctggcctcgatctactctccagat
cactccagcagcaacttctcacccagcccctcgacccctgtgggctcccctcagggcctg
ccggggacatcacagtggccccgagcaggggctcccggtgccttatcgcccagctacgat
gggggtctccctggcctgagcaagatggaagaccacctggacgaggccatccacgtgctt
cgcagccatgctgtgggcacagcaggcgacgtgcacgggctgctgcctggccccggagtg
ctggcctccagctttgtgggccccttgccgcttggcggtcggcacaccggcctggttggg
agtggccaccctgaggacggccttgcgggcagcgccagcctcttgcacaaccacactgcc
ctgcccagccaacctggcactctgcctgacctttcgcggccacctgactcctatagcgga
ctcgggcgagcgggagctgcggtggccgctggcgagatcaagcgggaggagaaggaggac
gaggagaacgcctcggtggcggacaactccgaggaggagaggaaggagctgaagggctcc
cgcgctcggaccagcccagacgaggacgaggacgaccttctccccccagagcagaaggcc
gagcgggagaaggagcgtcgggtggccaataatgcccgcgagcggctgcgggtccgggac
atcaatgaggcctttaaggagctggggcgcatgtgccagctgcacctcagcagcgagaag
ccccagaccaaactgctcatcctgcaccaggccgtgtcggtcatcctgcacctggagcag
caagtgcgagaacggaacctgaaccccaaagcagcctgcctgaagcggcgagaggaggag
aaggtgtcaggcgtggttggagaccccccgatggtgctgtcaggctcccacccgggcctg
agcgaggcccacaaccccaccgggcacatgtga
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