KEGG   Sciurus carolinensis (gray squirrel): 124969108
Entry
124969108         CDS       T08117                                 
Name
(RefSeq) CD209 antigen-like protein C
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03260  Virion - Human immunodeficiency virus
ncar03264  Virion - Flavivirus and Alphavirus
ncar03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
ncar03273  Virion - Lassa virus and SFTS virus
ncar04145  Phagosome
ncar04625  C-type lectin receptor signaling pathway
ncar05152  Tuberculosis
ncar05162  Measles
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    124969108
   03264 Virion - Flavivirus and Alphavirus
    124969108
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    124969108
   03273 Virion - Lassa virus and SFTS virus
    124969108
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124969108
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    124969108
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    124969108
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    124969108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124969108
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ncar04054]
    124969108
   04090 CD molecules [BR:ncar04090]
    124969108
   04091 Lectins [BR:ncar04091]
    124969108
Membrane trafficking [BR:ncar04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    124969108
Pattern recognition receptors [BR:ncar04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   124969108
CD molecules [BR:ncar04090]
 Proteins
  124969108
Lectins [BR:ncar04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   124969108
SSDB
Motif
Pfam: Lectin_C Chordopox_A33R Big_10
Other DBs
NCBI-GeneID: 124969108
NCBI-ProteinID: XP_047387893
LinkDB
Position
17:complement(4953312..4958832)
AA seq 240 aa
MSDFEEARAQQLGSLDEEELISSGSRSSFQRFGFRLTGGLKSIAGFLGHGPIPLVLKLLC
LMLLAGILMAVLVKVSKVSHFHEQKKSKQENIYQEVAQVKAEMGRLCRPCPWDWTFFQGN
CYFFSKSQRNWTDSVTACQEEGAQLVIIKSAEEQSFLQLTSKNKGDTWMGLSDLNNEGTW
YWVDGSYLFFRFMKYWNEGEPNNDGEEDCVEFRGDGWNDSRCELEKFWICKKSADSCSNK
NT seq 723 nt   +upstreamnt  +downstreamnt
atgagtgacttcgaggaagcgagggcgcagcagctgggatccctggacgaggaagaactg
ataagcagcggctccaggtcttcctttcaacgctttggattccgacttactggtggcctc
aagagcatcgcagggtttctgggccatggccccatccccctggtgcttaagctgctctgc
ctcatgctcttggctgggatcctgatggccgtccttgtcaaagtctccaaggtctcccac
ttccatgagcagaagaaatcaaaacaagagaacatctatcaggaagtagcccaggtgaag
gctgaaatgggccgcctgtgccgcccctgcccctgggactggacattcttccaaggaaac
tgttacttcttctctaagtcccaacggaactggactgactctgtcaccgcctgccaggaa
gagggggcccaactagtcatcatcaaaagtgctgaggagcagagcttcctgcagttgact
tctaagaataaaggcgacacctggatggggctgtcagacctgaacaacgagggcacgtgg
tactgggtggatggctcctatctgtttttcagattcatgaagtattggaatgaaggggag
cccaacaatgatggggaggaagactgcgtggaatttagaggcgatggctggaatgacagc
aggtgtgaacttgaaaaattctggatctgcaagaagtccgcggactcctgttccaacaaa
tga

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