KEGG   Sciurus carolinensis (gray squirrel): 124969110
Entry
124969110         CDS       T08117                                 
Name
(RefSeq) CD209 antigen-like protein E
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03260  Virion - Human immunodeficiency virus
ncar03264  Virion - Flavivirus and Alphavirus
ncar03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
ncar03273  Virion - Lassa virus and SFTS virus
ncar04145  Phagosome
ncar04625  C-type lectin receptor signaling pathway
ncar05152  Tuberculosis
ncar05162  Measles
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    124969110
   03264 Virion - Flavivirus and Alphavirus
    124969110
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    124969110
   03273 Virion - Lassa virus and SFTS virus
    124969110
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124969110
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    124969110
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    124969110
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    124969110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124969110
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ncar04054]
    124969110
   04090 CD molecules [BR:ncar04090]
    124969110
   04091 Lectins [BR:ncar04091]
    124969110
Membrane trafficking [BR:ncar04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    124969110
Pattern recognition receptors [BR:ncar04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   124969110
CD molecules [BR:ncar04090]
 Proteins
  124969110
Lectins [BR:ncar04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   124969110
SSDB
Motif
Pfam: Lectin_C DUF4148
Other DBs
NCBI-GeneID: 124969110
NCBI-ProteinID: XP_047387894
LinkDB
Position
17:4939702..4943674
AA seq 239 aa
MSDFKEARVQQLDPLEEELMASGTRYSVRDYGFPLPSRGGGFAGCLSSNYFLLMLQLLSL
TILAGLLMAVLVQVSKAPGSQEQEQELSKQKVYQELTQLKVGVDRLCRPCPWDWTFFQGN
CYFFSKSQRNWHDSVTACQEEGAQLVIIKSAEEQSFLQQTSKNKGSTWMGLSDQNQEATW
HWVDGSPLSRSFKYWNPGEPNNVGEEDCAEFTGDGWNDAKCDTEKFWVCKNSTASCSHT
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagtgacttcaaggaagcgagggtgcagcagctggaccccctggaggaggagctgatg
gccagcggtacaagatactccgtaagagactatggattcccactgccttccagaggtggc
ggttttgcaggatgtctgagctccaactacttcctgctgatgctgcagctactctccctc
acgatcttggctgggctcctgatggccgtccttgtccaagtctccaaggcgcccggctcc
caggaacaggagcaggagctgtccaagcagaaggtgtaccaggagctgacgcagctgaag
gtgggagtcgaccgcctgtgccgcccctgcccctgggactggacgttcttccaaggaaac
tgttacttcttctccaagtcccagcggaactggcacgactctgtcaccgcctgccaggaa
gagggggcccaactagtcatcatcaaaagtgccgaggagcagagcttcctgcagcagact
tccaagaataaaggcagcacctggatggggctctcagaccagaaccaggaagccacgtgg
cactgggtagatggttcgcctctgtcccgcagcttcaagtactggaacccaggggagccc
aacaacgtcggggaggaggattgcgcggagttcaccggcgacggctggaatgacgccaag
tgtgacacggagaagttctgggtctgcaagaactccacggcctcctgctcccacacctga

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