Sciurus carolinensis (gray squirrel): 124970295
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Entry
124970295 CDS
T08117
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00514
Other types of O-glycan biosynthesis
ncar04330
Notch signaling pathway
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124970295
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124970295
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124970295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124970295
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
124970295
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
O-Glycan
124970295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Hormone_3
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
124970295
NCBI-ProteinID:
XP_047389498
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All DBs
Position
18:complement(13953585..13961553)
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AA seq
378 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPSPVPAERGRRALRSLAGPAGAAPAPGLVAA
AAPRALAREVHSLSEYFNLLTRARRDAGPLSRGVPRPADGHPRPLAEPLAPRDVFIAVKT
TRKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHTGNVVNTNCSAAHSRQALSCKM
AVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLASYLHTQDVYIGKPSLDRPIQATERVG
ENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPASELHEQVTLSYGMFENKRNAVHVKGPFSVEADPSRFRS
IHCHLYPDTPWCPHTAIF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgtggccggcgcctgctgctggcgctggcgggtgcgctgcttgcctgc
ctcttggtgctcaccgccgacccgccgccgtccccagtgcccgccgagcgcggcaggcgc
gcgctgcgcagcttggcgggacctgcgggggcagccccagcgcccgggctggtggcggcg
gcggctcctagagcgctcgcccgtgaggtgcacagcctgtccgagtacttcaacttgctg
actcgcgcgcgcagagacgcgggcccgttgtccaggggtgttccccgccccgcggatggc
cacccgcggcccctggcagagccgctggcgccccgcgatgtcttcatcgcggtgaagacc
actaggaagtttcaccgcgcgcgcctggacctgctgttggagacatggatctctcgccat
aaggagatgacattcatcttcaccgacggggaagacgaagcactggccaggcacacgggc
aacgtggtcaacactaactgctcggcagcccacagccgccaggctctgtcctgcaagatg
gccgtggagtacgaccgcttcatcgagtccgggaggaagtggttctgccacgtggacgat
gacaactacgtcaatctgcgggccctgctgaggctgctggccagctacctgcacacccag
gatgtctacattggcaagcccagcctggaccgacccatccaggccacagagcgggtcggc
gagaacaaggtgcgccccgtgcacttctggtttgccactggtggggctggcttctgcatt
agccgtgggctggccctgaagatgagcccatgggccagcggtggccacttcatgagcacg
gctgagcggatccggctgcccgacgactgcaccatcggctacatcgtggaggccctgctg
ggcgtgcccctcatccgcagtggactcttccactctcacctggagaacctccagcaggtg
cctgcctctgagctccacgagcaggtgactctgagctatggcatgtttgaaaacaagcgg
aatgccgtccacgtgaagggacccttctccgtggaggctgacccatccaggttccgctcc
atccactgccacctgtatccggacacaccctggtgtccccacactgccatcttctag
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