Sciurus carolinensis (gray squirrel): 124976152
Help
Entry
124976152 CDS
T08117
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00280
Valine, leucine and isoleucine degradation
ncar00650
Butanoate metabolism
ncar00900
Terpenoid backbone biosynthesis
ncar01100
Metabolic pathways
ncar03320
PPAR signaling pathway
Module
ncar_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
124976152
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124976152
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124976152
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124976152
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
124976152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
124976152
NCBI-ProteinID:
XP_047394968
LinkDB
All DBs
Position
1:102147011..102169456
Genome browser
AA seq
507 aa
AA seq
DB search
MQRLLTPVRRVLQVGRVMQEASLAPARLLPAAHQRFSTISAVPLTKTDTWPKDVGILALE
VYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTHMGFCSVQEDINSLCLTVVQRLMERTQLP
WDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWM
ESSYWDGRYALVVCGDIAVYPNGNARPTGGAGAVAMLIGPKAPLALEQGLRGTHMENAYD
FYKPNLASEYPMVDGKLSIQCYLRALDRCYASYRQKIQKQWKQAGIDRPFTLDDLQYMIF
HTPFCKMVQKSLARLMFNDFLSSSGDTQTLYQGLEAFRELKLEDTYTNKDLDKALLKASL
DMFNKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQDLAGSRIGAFSYGSGLAASLF
SFRVSQDASPGSPLDTLVSSISDLPKRLASRKRMSPEEFTEIMNQREQFYHKVNFSPPGD
TNNLFPGTWYLERVDEMHRRKYARRPI
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggctgttgactccagtgaggcgggtcctgcaggtgggaagagtgatgcaggag
gcttccctcgcacctgctcgcctgctccctgcagcccaccaaaggttttctactatctct
gctgtccccctcaccaaaacagatacttggccaaaagatgtgggcatccttgccttggag
gtctacttcccagcccaatacgtggaccaaactgacttagagaagtacaacaacgtggaa
gcagggaagtatacagtgggcttgggtcaaacccatatgggcttttgctcagtccaggag
gacatcaactccctctgcctgacagtggtacaacggctgatggagcgcacacagctccca
tgggactctgtgggccggctggaagtgggcacggagaccatcattgacaagtccaaggct
gtcaaaacagtgctcatggaactcttccaggattctggcaacactgacattgagggcata
gataccaccaatgcatgctatggtggcactgcatccctcttcaatgctgccaactggatg
gagtctagctactgggatggtcgctatgcactggtggtctgcggagacatcgcagtctat
cccaatggtaatgctcgccccacaggaggggctggagctgtggcaatgctgattgggccc
aaggcccctctagccctggagcaagggcttaggggaacccatatggagaatgcatatgac
ttctacaagccgaatttggcctcagagtaccccatggtggatgggaaactctccatccag
tgctacttgcgggccttggatcgatgttatgcatcataccgccagaaaatccagaaacag
tggaagcaagctggcattgaccgacctttcaccctggacgatttacagtatatgatcttt
cacacacccttttgcaagatggtccagaaatctctggctcgcctgatgttcaatgacttc
ctatcatccagtggtgacacacagaccttataccaggggctggaggccttcagggagcta
aagctggaagatacctacaccaacaaggacctggacaaagcacttctaaaggcctctctg
gacatgttcaacaaaaaaaccaaagcctccctttacctttccacacacaatgggaacatg
tatacctcatccctgtatgggtgcctggcctcgcttctgtcccatcactctgctcaggac
ttggctggctccaggattggtgccttctcctatggctctggcttagcagcaagtttgttt
tcatttcgagtgtcccaggatgcttctccaggttccccactagacacgctagtgtctagc
atatcagacctgccaaaacgccttgcctcccggaaacgcatgtctcctgaggaattcaca
gaaattatgaaccaaagggagcaattctaccacaaggtaaatttctcaccacctggagac
acaaacaaccttttcccgggtacttggtacctggagcgagtggatgaaatgcatcgccga
aagtatgcccggcgtcccatctaa
DBGET
integrated database retrieval system
